RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FAM200BP0CF97 657 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 GJA1P17302 382 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 ADORA2BP29275 332 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 USP46P62068 366 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 HTR4Q13639 388 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 TEAD2Q15562 447 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 TAF12Q16514 161 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 RBBP8NLQ8NC74 664 aaPredicted RBP21.54■■□□□ 1.04
SKA3-205ENST00000465471 ANKRD20A12PQ8NF67 263 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 KHSRPQ92945 711 aaKnown RBP eCLIP21.54■■□□□ 1.04
SKA3-205ENST00000465471 IL37Q9NZH6 218 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 UXTQ9UBK9 157 aaPredicted RBP21.54■■□□□ 1.04
SKA3-205ENST00000465471 LIMD1Q9UGP4 676 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 AJAP1Q9UKB5 411 aaPredicted RBP21.54■■□□□ 1.04
SKA3-205ENST00000465471 KIAA1257Q9ULG3 409 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 ANAPC1Q9H1A4 1944 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 MYO10Q9HD67 2058 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 LGALS16A8MUM7 142 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 HHLA1C9JL84 531 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 MFAP3P55082 362 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 SHC3Q92529 594 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 NXPE3Q969Y0 559 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 ZSWIM3Q96MP5 696 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 ZSWIM1Q9BR11 485 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 GPR88Q9GZN0 384 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 KCNK12Q9HB15 430 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 PNPLA8Q9NP80 782 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 IGSF9Q9P2J2 1179 aa21.53■■□□□ 1.04
SKA3-205ENST00000465471 MAGED2Q9UNF1 606 aaPredicted RBP21.53■■□□□ 1.04
SKA3-205ENST00000465471 FAM92AA1XBS5 289 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 O00370 1275 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 PES1O00541 588 aaKnown RBP21.52■■□□□ 1.04
SKA3-205ENST00000465471 TPM2P07951 284 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 VDRP11473 427 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 NPR3P17342 541 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 FCARP24071 287 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 SGO2Q562F6 1265 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 STXBP5Q5T5C0 1151 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 NUP93Q8N1F7 819 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 TFAP2BQ92481 460 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 MCRS1Q96EZ8 462 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 ASB16Q96NS5 453 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 NAA15Q9BXJ9 866 aaKnown RBP21.52■■□□□ 1.04
SKA3-205ENST00000465471 DUSP16Q9BY84 665 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 ATXN3LQ9H3M9 355 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 TRPV4Q9HBA0 871 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 PLCB1Q9NQ66 1216 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 EHD2Q9NZN4 543 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 MUTYHQ9UIF7 546 aa21.52■■□□□ 1.04
SKA3-205ENST00000465471 SOBPA7XYQ1 873 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 BECN2A8MW95 431 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 ASGR2P07307 311 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 CDK11BP21127 795 aaKnown RBP21.51■■□□□ 1.03
SKA3-205ENST00000465471 RFX1P22670 979 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 WEE1P30291 646 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 SLC5A3P53794 718 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 MAP3K7CLP57077 242 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 CYP4F8P98187 520 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 KLHDC7AQ5VTJ3 777 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 MTSS1LQ765P7 747 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 TTC30AQ86WT1 665 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 ANKRD52Q8NB46 1076 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 FGF14Q92915 247 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 GCNAQ96QF7 691 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 COMMD8Q9NX08 183 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 ZMYM5Q9UJ78 669 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 DNAJC12Q9UKB3 198 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 SIK3Q9Y2K2 1263 aa21.51■■□□□ 1.03
SKA3-205ENST00000465471 RTN3O95197 1032 aaPredicted RBP21.5■■□□□ 1.03
SKA3-205ENST00000465471 PKDCCQ504Y2 493 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 ARHGAP15Q53QZ3 475 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 FAM78AQ5JUQ0 283 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 FKBP15Q5T1M5 1219 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 PARM1Q6UWI2 310 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 LUZP1Q86V48 1076 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 ERGIC2Q96RQ1 377 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 LSM14BQ9BX40 385 aaKnown RBP21.5■■□□□ 1.03
SKA3-205ENST00000465471 GANQ9H2C0 597 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 TASP1Q9H6P5 420 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 TSPAN16Q9UKR8 245 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 SORCS3Q9UPU3 1222 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 FHOD1Q9Y613 1164 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 NUMBLQ9Y6R0 609 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 NCANO14594 1321 aa21.5■■□□□ 1.03
SKA3-205ENST00000465471 MYO16Q9Y6X6 1858 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 TRIOO75962 3097 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 DLL1O00548 723 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 UCHL3P15374 230 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 CD19P15391 556 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 DDX6P26196 483 aaKnown RBP eCLIP21.49■■□□□ 1.03
SKA3-205ENST00000465471 ARHGAP44Q17R89 818 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 GOLGA7BQ2TAP0 167 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 GPR158Q5T848 1215 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 LRSAM1Q6UWE0 723 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 LCLAT1Q6UWP7 414 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 GPRIN1Q7Z2K8 1008 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 SCAMP5Q8TAC9 235 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 RSAD2Q8WXG1 361 aa21.49■■□□□ 1.03
SKA3-205ENST00000465471 OVCA2Q8WZ82 227 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms