RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IQCB1Q15051 598 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 TANGO2Q6ICL3 276 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 CLEC20AQ6ZU45 233 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 GPRIN1Q7Z2K8 1008 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 RBBP8NLQ8NC74 664 aaPredicted RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 UBA3Q8TBC4 463 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 TFAP2BQ92481 460 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 SLC46A2Q9BY10 475 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 DMAP1Q9NPF5 467 aaPredicted RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 ACP6Q9NPH0 428 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
CUX1-207ENST00000465461 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 NCANO14594 1321 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
CUX1-207ENST00000465461 GTPBP10A4D1E9 387 aaKnown RBP12.35□□□□□ -0.43
CUX1-207ENST00000465461 HHLA1C9JL84 531 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 TULP2O00295 520 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 MICAL2O94851 1124 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 CDC25CP30307 473 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 USP8P40818 1118 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 SLC5A3P53794 718 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 YWHAEP62258 255 aaKnown RBP12.35□□□□□ -0.43
CUX1-207ENST00000465461 GCNT1Q02742 428 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 APTXQ7Z2E3 356 aaKnown RBP12.35□□□□□ -0.43
CUX1-207ENST00000465461 LUZP1Q86V48 1076 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 NUP93Q8N1F7 819 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 TTC39CQ8N584 583 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 MAB21L3Q8N8X9 362 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 MYRFLQ96LU7 910 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 BPIFA3Q9BQP9 254 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 APEX2Q9UBZ4 518 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
CUX1-207ENST00000465461 TSPAN16Q9UKR8 245 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 MYH10P35580 1976 aa12.35□□□□□ -0.43
CUX1-207ENST00000465461 C2orf78A6NCI8 922 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 FAM86C2PA6NEL3 165 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 BECN2A8MW95 431 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 DCXO43602 365 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ABL1P00519 1130 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 VDRP11473 427 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 NPR3P17342 541 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 TRIM21P19474 475 aaKnown RBP12.34□□□□□ -0.43
CUX1-207ENST00000465461 FCARP24071 287 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 PGFP49763 221 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 MFAP3P55082 362 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ZXDAP98168 799 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 TAF10Q12962 218 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 GRM2Q14416 872 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ARHGAP15Q53QZ3 475 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 TTC30AQ86WT1 665 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
CUX1-207ENST00000465461 TRMT2BQ96GJ1 504 aaKnown RBP12.34□□□□□ -0.43
CUX1-207ENST00000465461 ASB16Q96NS5 453 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 GCNAQ96QF7 691 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 SLC22A12Q96S37 553 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 CYP2S1Q96SQ9 504 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 DUSP16Q9BY84 665 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 GDE1Q9NZC3 331 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 ZFP37Q9Y6Q3 630 aaPredicted RBP12.34□□□□□ -0.43
CUX1-207ENST00000465461 OBSL1O75147 1896 aa12.34□□□□□ -0.43
CUX1-207ENST00000465461 FAM170AA1A519 330 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 O00370 1275 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
CUX1-207ENST00000465461 PIK3R2O00459 728 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 EPHB6O15197 1021 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 PRAMEF12O95522 483 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 FGF19O95750 216 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 TPM2P07951 284 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 CFHP08603 1231 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 YWHAQP27348 245 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 ZNF132P52740 706 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 GPC5P78333 572 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 PDE4CQ08493 712 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 TDGQ13569 410 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 IER5LQ5T953 404 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 KLHDC7AQ5VTJ3 777 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms