RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 GRID1Q9ULK0 1009 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 LACTBL1A8MY62 500 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 CILPO75339 1184 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 UNC5CO95185 931 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 SLC25A27O95847 323 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 YARSP54577 528 aaKnown RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 MTM1Q13496 603 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 JADE1Q6IE81 842 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 FBXO16Q8IX29 292 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 CMASQ8NFW8 434 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 GIMAP7Q8NHV1 300 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 TWNKQ96RR1 684 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 ACSS3Q9H6R3 686 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 RSAD1Q9HA92 442 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 EDF1O60869 148 aaKnown RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 KRT16P08779 473 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 STAG3L1P0CL83 205 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 CCNB1P14635 433 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 MSH2P43246 934 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 KCTD2Q14681 263 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 ASRGL1Q7L266 308 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 ERP27Q96DN0 273 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 HEXIM2Q96MH2 286 aaKnown RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 NCAPGQ9BPX3 1015 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 ETNK1Q9HBU6 452 aa19.18■□□□□ 0.66
SYNE4-204ENST00000465425 SSU72Q9NP77 194 aaKnown RBP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
SYNE4-204ENST00000465425 GPR25O00155 361 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 IRF6O14896 467 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 DCTN3O75935 186 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TMEM63AO94886 807 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TRUB2O95900 331 aaKnown RBP19.17■□□□□ 0.66
SYNE4-204ENST00000465425 ATICP31939 592 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 PHKA2P46019 1235 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 IGBP1P78318 339 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 RNASELQ05823 741 aaKnown RBP19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TAF5Q15542 800 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 ADGRD1Q6QNK2 874 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 MCRS1Q96EZ8 462 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 OTUD5Q96G74 571 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 ELOVL4Q9GZR5 314 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 MYLK2Q9H1R3 596 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 R3HDMLQ9H3Y0 253 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TRIM33Q9UPN9 1127 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TCRBV7S3A2A0A539 114 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 E7ESA3 106 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 PIAS1O75925 651 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 HMGCRP04035 888 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 IQCF3P0C7M6 154 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TXNP10599 105 aaKnown RBP19.17■□□□□ 0.66
SYNE4-204ENST00000465425 GABRB2P47870 512 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 TNFAIP2Q03169 654 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 MOGSQ13724 837 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 WDR78Q5VTH9 848 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 DLK2Q6UY11 383 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 COPS5Q92905 334 aa19.17■□□□□ 0.66
SYNE4-204ENST00000465425 ZMYND8Q9ULU4 1186 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-204ENST00000465425 A0A0G2JMZ2 1700 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 SOCS7O14512 581 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 CSDE1O75534 798 aaKnown RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ATP5HO75947 161 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 CDH6P55285 790 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ROR1Q01973 937 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 DARS2Q6PI48 645 aaKnown RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 GPC2Q8N158 579 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 TMEM130Q8N3G9 435 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 RAB3IPQ96QF0 476 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 CYP3A43Q9HB55 503 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 IKBKGQ9Y6K9 419 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ITGBL1O95965 494 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 VDRP11473 427 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 STIP1P31948 543 aaKnown RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 PCK1P35558 622 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 GPD2P43304 727 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ZNF143P52747 638 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 DPYSL3Q14195 570 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ZC3H12AQ5D1E8 599 aaKnown RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 FYB2Q5VWT5 728 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ANKLE1Q8NAG6 615 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 UBA3Q8TBC4 463 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ZNF75CPQ92670 426 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-204ENST00000465425 ERAP1Q9NZ08 941 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 MCM8Q9UJA3 840 aa19.16■□□□□ 0.66
SYNE4-204ENST00000465425 A0A0G2JLL6 359 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-204ENST00000465425 MCF2P10911 925 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 ATP11AP98196 1134 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 PRRT2Q7Z6L0 340 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-204ENST00000465425 RPAINQ86UA6 219 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 ALKBH8Q96BT7 664 aaKnown RBP19.15■□□□□ 0.66
SYNE4-204ENST00000465425 HPDLQ96IR7 371 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 PPP1R16BQ96T49 567 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 CYTH2Q99418 400 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 MMP19Q99542 508 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 WDR83Q9BRX9 315 aaKnown RBP19.15■□□□□ 0.66
SYNE4-204ENST00000465425 NFKBIZQ9BYH8 718 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 ASB7Q9H672 318 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms