RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 UCHL3P15374 230 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 SSTR3P32745 418 aaPredicted RBP14.51□□□□□ -0.09
LIMD1-203ENST00000465039 BPIFB4P59827 614 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 NTHL1P78549 312 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 CNGA2Q16280 664 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 FILIP1LQ4L180 1135 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 KLHDC7AQ5VTJ3 777 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 DPY19L2P1Q6NXN4 242 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 LCLAT1Q6UWP7 414 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 CLEC20AQ6ZU45 233 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 GAREM2Q75VX8 874 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 RRAGAQ7L523 313 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 KIAA1958Q8N8K9 716 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 SHKBP1Q8TBC3 707 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 MYADMQ96S97 322 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 NAA15Q9BXJ9 866 aaKnown RBP14.51□□□□□ -0.09
LIMD1-203ENST00000465039 VPS16Q9H269 839 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 TMEM30AQ9NV96 361 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 HESX1Q9UBX0 185 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 DENND4CQ5VZ89 1909 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 A0A1W2PQC6 194 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 CLDN5O00501 218 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 MED7O43513 233 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 MOSPD3O75425 235 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 ECI2O75521 394 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 F11P03951 625 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 MYL4P12829 197 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 ATP1A3P13637 1013 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 GABRR2P28476 465 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 CCR2P41597 374 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 TUBP50607 506 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 BST2Q10589 180 aaKnown RBP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 KCNMA1Q12791 1236 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 HTR4Q13639 388 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF394Q53GI3 561 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 PPP1R26Q5T8A7 1209 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 SNX30Q5VWJ9 437 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 UBALD2Q8IYN6 164 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 FAM71AQ8IYT1 594 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 ITFG1Q8TB96 612 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 FEZF2Q8TBJ5 459 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 MRPS31Q92665 395 aaKnown RBP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 SMARCD2Q92925 531 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 KAT5Q92993 513 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 SMOQ99835 787 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 TSPY26PQ9H489 355 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 TASP1Q9H6P5 420 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF334Q9HCZ1 680 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 OBP2AQ9NY56 170 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 DNAJC12Q9UKB3 198 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 SORCS3Q9UPU3 1222 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 SIK3Q9Y2K2 1263 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 OBSL1O75147 1896 aa14.5□□□□□ -0.09
LIMD1-203ENST00000465039 NUP210Q8TEM1 1887 aaPredicted RBP14.5□□□□□ -0.09
LIMD1-203ENST00000465039 A0A1B0GTH6 734 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 A0A1W2PRU2 124 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ALADP13716 330 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 CD19P15391 556 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 CEBPBP17676 345 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 YWHAQP27348 245 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 PLA2G4AP47712 749 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 GPR15P49685 360 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 PSEN1P49768 467 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 SLC5A3P53794 718 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 CACNA2D1P54289 1103 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 UBXN1Q04323 297 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ORC1Q13415 861 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 MTMR3Q13615 1198 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF268Q14587 947 aaPredicted RBP14.49□□□□□ -0.09
LIMD1-203ENST00000465039 PTPN21Q16825 1174 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 PKDCCQ504Y2 493 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 TMEM150AQ86TG1 271 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 MON1AQ86VX9 555 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 RNF135Q8IUD6 432 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 SCML4Q8N228 414 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ZMIZ2Q8NF64 920 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 GIPC2Q8TF65 315 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ELSPBP1Q96BH3 223 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 IQCDQ96DY2 449 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ASB16Q96NS5 453 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 COL25A1Q9BXS0 654 aaPredicted RBP14.49□□□□□ -0.09
LIMD1-203ENST00000465039 STK33Q9BYT3 514 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 KIF9Q9HAQ2 790 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
LIMD1-203ENST00000465039 TSPAN16Q9UKR8 245 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 MYO6Q9UM54 1294 aa14.49□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF638Q14966 1978 aaKnown RBP14.49□□□□□ -0.09
LIMD1-203ENST00000465039 MYH10P35580 1976 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 HHLA1C9JL84 531 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 TNFRSF10AO00220 468 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 TPM3P06753 285 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 KRT5P13647 590 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 ADORA2BP29275 332 aa14.48□□□□□ -0.09
LIMD1-203ENST00000465039 PTK2Q05397 1052 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms