RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CHKAP35790 457 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 BUD31P41223 144 aaPredicted RBP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 GRK6P43250 576 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 MTHFSP49914 203 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 TP53BP2Q13625 1128 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 TUBA3CQ13748 450 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 CCNIQ14094 377 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 RAB30Q15771 203 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 SLC5A9Q2M3M2 681 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 ZACNQ401N2 412 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 FAXCQ5TGI0 409 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 VPS53Q5VIR6 699 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 TUBA3EQ6PEY2 450 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 CCDC174Q6PII3 467 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 KCNV1Q6PIU1 500 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 DBX2Q6ZNG2 339 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 KCTD20Q7Z5Y7 419 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 PRRT2Q7Z6L0 340 aaPredicted RBP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 ARHGEF19Q8IW93 802 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 SPATA5Q8NB90 893 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 DNAJB14Q8TBM8 379 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 SSH3Q8TE77 659 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 CACTINQ8WUQ7 758 aaKnown RBP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 TRIM63Q969Q1 353 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 LENG9Q96B70 501 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 C18orf8Q96DM3 657 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 PTCD3Q96EY7 689 aaKnown RBP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 RMDN3Q96TC7 470 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 GDF15Q99988 308 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 ACTRT3Q9BYD9 372 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 SLC25A32Q9H2D1 315 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 TMOD4Q9NZQ9 345 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 HPSEQ9Y251 543 aa4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 MORC2Q9Y6X9 1032 aaPredicted RBP4.35□□□□□ -1.71
HMGXB4-205ENST00000464480 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 SYT5O00445 386 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 CREB3O43889 395 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 CCNT2O60583 730 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 TLR5O60602 858 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 CSF1RP07333 972 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 ITGAMP11215 1152 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 TYRP1P17643 537 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 GATA3P23771 443 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 PDIA3P30101 505 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 ATICP31939 592 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 HALP42357 657 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 NXPH1P58417 271 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 KCNAB1Q14722 419 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 MAPKAPK3Q16644 382 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 LY6G5CQ5SRR4 150 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 GGT6Q6P531 493 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 TLDC1Q6P9B6 456 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 KIAA0408Q6ZU52 694 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 CCDC28AQ8IWP9 274 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 PROKR1Q8TCW9 393 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 IPO4Q8TEX9 1081 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 OSCP1Q8WVF1 389 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 FAM227BQ96M60 508 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 SCLT1Q96NL6 688 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 TRIM5Q9C035 493 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 AMBRA1Q9C0C7 1298 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 PCDHAC1Q9H158 963 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 AGO4Q9HCK5 861 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 LRFN1Q9P244 771 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 ZMYND8Q9ULU4 1186 aaPredicted RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 SSX2IPQ9Y2D8 614 aa4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 REXO2Q9Y3B8 237 aaKnown RBP4.34□□□□□ -1.71
HMGXB4-205ENST00000464480 CENPVL1A0A0U1RR11 272 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 LGALS16A8MUM7 142 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 PLSCR1O15162 318 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 LPXNO60711 386 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GLP2RO95838 553 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ADRB1P08588 477 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 MST1P26927 711 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ADORA2AP29274 412 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 EPHA3P29320 983 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 SLC5A2P31639 672 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 PGDP52209 483 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 BCAT1P54687 386 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 NSUN2Q08J23 767 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GPS1Q13098 491 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 SPARCL1Q14515 664 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 PFKFB4Q16877 469 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 C4orf46Q504U0 113 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 DEPDC1Q5TB30 811 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ABHD17BQ5VST6 288 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 RHOUQ7L0Q8 258 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GPR149Q86SP6 731 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GATAD2AQ86YP4 633 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 NKAPQ8N5F7 415 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 MYCT1Q8N699 235 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ATG16L2Q8NAA4 619 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms