RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SLC7A9P82251 487 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 ZXDBP98169 803 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 ZNF252P-AS1Q0IIN9 211 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 CRY1Q16526 586 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 ANO7Q6IWH7 933 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 UNQ6494/PRO21346Q6UXR6 183 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 CYP2U1Q7Z449 544 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 TTC16Q8NEE8 873 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 OLIG1Q8TAK6 271 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 MYLPFQ96A32 169 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 TPSD1Q9BZJ3 242 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 CRTAC1Q9NQ79 661 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 INTS13Q9NVM9 706 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 EHD2Q9NZN4 543 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-210ENST00000464078 ANKRD11Q6UB99 2663 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 GIPC1O14908 333 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 CYP17A1P05093 508 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 CEACAM1P13688 526 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 BCKDHBP21953 392 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 TXLNAP40222 546 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 EIF2DP41214 584 aaKnown RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 PPP3CCP48454 512 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 USP46P62068 366 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 NOP14P78316 857 aaKnown RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 MRPS21P82921 87 aaKnown RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 HSF5Q4G112 596 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 C2orf27AQ580R0 203 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 SH3PXD2AQ5TCZ1 1133 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 SYCP3Q8IZU3 236 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 ANKRD36BP1Q96IX9 119 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 TRPM5Q9NZQ8 1165 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 EVLQ9UI08 416 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 SRPRBQ9Y5M8 271 aaKnown RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 PTPRJQ12913 1337 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 DSPP15924 2871 aaKnown RBP18.48■□□□□ 0.55
HMGN1-210ENST00000464078 CACNA1EQ15878 2313 aa18.48■□□□□ 0.55
HMGN1-210ENST00000464078 GOLGA8IPA6NC78 632 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 GOLGA8JA6NMD2 632 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 LEFTY2O00292 366 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 CDX4O14627 284 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-210ENST00000464078 ATP2C2O75185 946 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 PSMC1P62191 440 aaKnown RBP18.47■□□□□ 0.55
HMGN1-210ENST00000464078 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-210ENST00000464078 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 TMEM121BQ9BXQ6 578 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-210ENST00000464078 FGFBP2Q9BYJ0 223 aa18.47■□□□□ 0.55
HMGN1-210ENST00000464078 ZNF840PA6NDX5 716 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 C1QTNF9BB2RNN3 333 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 SLC9A3R1O14745 358 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-210ENST00000464078 TRIM66O15016 1216 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 C1QTNF9P0C862 333 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 WARSP23381 471 aaKnown RBP18.46■□□□□ 0.55
HMGN1-210ENST00000464078 BDNFP23560 247 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 LMO2P25791 158 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 SEC13P55735 322 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 SURF1Q15526 300 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 OR5B17Q8NGF7 314 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 MYCBPAPQ8TBZ2 947 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 PCED1BQ96HM7 432 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 C8orf48Q96LL4 319 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 INVSQ9Y283 1065 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 R3HCC1Q9Y3T6 440 aaKnown RBP18.46■□□□□ 0.55
HMGN1-210ENST00000464078 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
HMGN1-210ENST00000464078 MORC2Q9Y6X9 1032 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-210ENST00000464078 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 TMEM8BA6NDV4 472 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 PATE3B3GLJ2 98 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 ALDH1A2O94788 518 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 OAS1P00973 400 aaKnown RBP18.45■□□□□ 0.54
HMGN1-210ENST00000464078 TNNC2P02585 160 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 IDEP14735 1019 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 HNRNPLP14866 589 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGN1-210ENST00000464078 ANXA13P27216 316 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 GRIK1P39086 918 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 P2RY2P41231 377 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 PI4KAP42356 2102 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 SPDYCQ5MJ68 293 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 TMEM92Q6UXU6 159 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 FILIP1Q7Z7B0 1213 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 WDR49Q8IV35 697 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 ADGRG2Q8IZP9 1017 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 IL17RCQ8NAC3 791 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 WHAMMQ8TF30 809 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 PCIF1Q9H4Z3 704 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 GON4LQ3T8J9 2241 aa18.45■□□□□ 0.54
HMGN1-210ENST00000464078 ITPR1Q14643 2758 aa18.44■□□□□ 0.54
HMGN1-210ENST00000464078 TNFRSF10BO14763 440 aa18.44■□□□□ 0.54
HMGN1-210ENST00000464078 DHPSP49366 369 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-210ENST00000464078 LMAN2Q12907 356 aa18.44■□□□□ 0.54
HMGN1-210ENST00000464078 FOXC1Q12948 553 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms