RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 RIBC1Q8N443 379 aaPredicted RBP18.34■□□□□ 0.53
LMO2-204ENST00000464025 ACTL9Q8TC94 416 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 DNAJB3Q8WWF6 145 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 SOCS4Q8WXH5 440 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 DNAI2Q9GZS0 605 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 AP5M1Q9H0R1 490 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
LMO2-204ENST00000464025 E7EVH7 732 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 GNAT1P11488 350 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 MAGEA4P43358 317 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 HUNKP57058 714 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 UBXN11Q5T124 520 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 RNASEH2BQ5TBB1 312 aaKnown RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 OR6B2Q6IFH4 312 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 OLFML1Q6UWY5 402 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 CYP4V2Q6ZWL3 525 aaPredicted RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 SESTD1Q86VW0 696 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 TTC30AQ86WT1 665 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 GLIS1Q8NBF1 620 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 KCTD6Q8NC69 237 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 TEKT4Q8WW24 435 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 ACSF2Q96CM8 615 aaPredicted RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 ZNF560Q96MR9 790 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 XPO6Q96QU8 1125 aaKnown RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.52
LMO2-204ENST00000464025 TBCBQ99426 244 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 CCDC77Q9BR77 488 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 GJD2Q9UKL4 321 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
LMO2-204ENST00000464025 NME7Q9Y5B8 376 aa18.33■□□□□ 0.52
LMO2-204ENST00000464025 ZNF487B1APH4 448 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 PPEF2O14830 753 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 KPNA6O60684 536 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 ECM2O94769 699 aaPredicted RBP18.32■□□□□ 0.52
LMO2-204ENST00000464025 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 SEC24CP53992 1094 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 INHBEP58166 350 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 SLC6A3Q01959 620 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 GPS1Q13098 491 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 PDK2Q15119 407 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
LMO2-204ENST00000464025 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 KCNT1Q5JUK3 1230 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 FBXO47Q5MNV8 452 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 TRNP1Q6NT89 227 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 C12orf29Q8N999 325 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 TMEM40Q8WWA1 233 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 CFAP57Q96MR6 1250 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 APBA2Q99767 749 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 NXF3Q9H4D5 531 aaKnown RBP18.32■□□□□ 0.52
LMO2-204ENST00000464025 PPANQ9NQ55 473 aaKnown RBP18.32■□□□□ 0.52
LMO2-204ENST00000464025 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 GINS2Q9Y248 185 aa18.32■□□□□ 0.52
LMO2-204ENST00000464025 SMIM28A0A1B0GU29 152 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 SGK1O00141 431 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 ALOX15BO15296 676 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 TREHO43280 583 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 CHN1P15882 459 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 CORO7P57737 925 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 CBLBQ13191 982 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 TFDP2Q14188 446 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 RASA2Q15283 850 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 PMF1Q6P1K2 205 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 MICALCLQ6ZW33 695 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 DPH6Q7L8W6 267 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 YTHDF3Q7Z739 585 aaKnown RBP18.31■□□□□ 0.52
LMO2-204ENST00000464025 ACOT1Q86TX2 421 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 EXOC3L1Q86VI1 746 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 UHMK1Q8TAS1 419 aaKnown RBP18.31■□□□□ 0.52
LMO2-204ENST00000464025 ATXN2LQ8WWM7 1075 aaKnown RBP18.31■□□□□ 0.52
LMO2-204ENST00000464025 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.52
LMO2-204ENST00000464025 C18orf25Q96B23 403 aaPredicted RBP18.31■□□□□ 0.52
LMO2-204ENST00000464025 PPCSQ9HAB8 311 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 EURLQ9NYK6 297 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
LMO2-204ENST00000464025 ACTL7BQ9Y614 415 aa18.31■□□□□ 0.52
LMO2-204ENST00000464025 CDH16O75309 829 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 ZSCAN5DPP0CG00 497 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 DESP17661 470 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 STIP1P31948 543 aaKnown RBP18.3■□□□□ 0.52
LMO2-204ENST00000464025 RDXP35241 583 aaKnown RBP18.3■□□□□ 0.52
LMO2-204ENST00000464025 PLCB3Q01970 1234 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 LONRF1Q17RB8 773 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 SKIDA1Q1XH10 827 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 CCDC14Q49A88 953 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 ANKRD52Q8NB46 1076 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
LMO2-204ENST00000464025 PEBP4Q96S96 227 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 TMEM121Q9BTD3 319 aa18.3■□□□□ 0.52
LMO2-204ENST00000464025 PCSK1NQ9UHG2 260 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms