RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TTC23LQ6PF05 361 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 FIP1L1Q6UN15 594 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RGS9BPQ6ZS82 235 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 USP49Q70CQ1 688 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 USP37Q86T82 979 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 MTDHQ86UE4 582 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ELMOD2Q8IZ81 293 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ELMOD1Q8N336 334 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ABTB2Q8N961 1025 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 USP38Q8NB14 1042 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 HIPK4Q8NE63 616 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PPP1R14CQ8TAE6 165 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TRPC4APQ8TEL6 797 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF296Q8WUU4 475 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ESR2Q92731 530 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PEX13Q92968 403 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TAMM41Q96BW9 452 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 OMA1Q96E52 524 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CNBD2Q96M20 576 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NEUROD6Q96NK8 337 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CIB1Q99828 191 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 OSBPL6Q9BZF3 934 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ALDH8A1Q9H2A2 487 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 SMYD3Q9H7B4 428 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GBA2Q9HCG7 927 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DISC1Q9NRI5 854 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 THEGQ9P2T0 379 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NARFQ9UHQ1 456 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DCTN4Q9UJW0 460 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CAPN11Q9UMQ6 739 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ERVK-11Q9UQG0 969 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ATP11BQ9Y2G3 1177 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AK5Q9Y6K8 562 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NUMBLQ9Y6R0 609 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PDS5AQ29RF7 1337 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 MYH7P12883 1935 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TTLL8A6PVC2 850 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HAT1O14929 419 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ZW10O43264 779 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 B4GALT4O60513 344 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCNT1O60563 726 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PPP6R2O75170 966 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SPAG7O75391 227 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SMIM18P0DKX4 95 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 VSIG8P0DPA2 414 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 BMP1P13497 986 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ITGA4P13612 1032 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NPR1P16066 1061 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 VCLP18206 1134 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 RXRAP19793 462 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ITGA6P23229 1130 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 RRM1P23921 792 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PGM1P36871 562 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CTSOP43234 321 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NR4A2P43354 598 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PHKA2P46019 1235 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CACNB3P54284 484 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TPTEP56180 551 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 AP2B1P63010 937 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NIPAL4Q0D2K0 466 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ITGADQ13349 1161 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TEAD4Q15561 434 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CHRNA2Q15822 529 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ZYXQ15942 572 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SWI5Q1ZZU3 235 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM16LQ309B1 348 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GRAMD1BQ3KR37 738 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CRTC2Q53ET0 693 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ELMSAN1Q6PJG2 1045 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCBE1Q6UXH8 406 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 STOX1Q6ZVD7 989 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LPCAT2Q7L5N7 544 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GATAD2AQ86YP4 633 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NELFCDQ8IXH7 590 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CPNE9Q8IYJ1 553 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 POU5F2Q8N7G0 328 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GMCL1Q96IK5 515 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GCNAQ96QF7 691 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 VPS35Q96QK1 796 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HERC2P3Q9BVR0 1158 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC134Q9H6E4 229 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SLCO1B3Q9NPD5 702 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GPR108Q9NPR9 543 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 COQ3Q9NZJ6 369 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TXNDC16Q9P2K2 825 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CRNNQ9UBG3 495 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 RSL24D1Q9UHA3 163 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LIMA1Q9UHB6 759 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ASAP1Q9ULH1 1129 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ZMIZ1Q9ULJ6 1067 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PPM1HQ9ULR3 514 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SLC30A1Q9Y6M5 507 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 EMSYQ7Z589 1322 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ADGRF5Q8IZF2 1346 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LOC102724428A0A0B4J2F2 783 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GSC2O15499 205 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC22O60826 627 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms