RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	WARS	P23381	471 aa	Known RBP	11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	PCSK1	P29120	753 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	IFNAR2	P48551	515 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	NOP14	P78316	857 aa	Known RBP	11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	SLC7A9	P82251	487 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	ALCAM	Q13740	583 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	RRAGB	Q5VZM2	374 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	RNF43	Q68DV7	783 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	VSTM1	Q6UX27	236 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	TMEM92	Q6UXU6	159 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	SV2B	Q7L1I2	683 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	C12orf40	Q86WS4	652 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	CBWD2	Q8IUF1	395 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	SCN4B	Q8IWT1	228 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	GPD1L	Q8N335	351 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	PHTF2	Q8N3S3	785 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	KIAA1958	Q8N8K9	716 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	MDGA1	Q8NFP4	955 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	HPS3	Q969F9	1004 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	PCED1B	Q96HM7	432 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	CNOT6L	Q96LI5	555 aa	Known RBP	11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	CCDC39	Q9UFE4	941 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	RALY	Q9UKM9	306 aa	Known RBP	11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	CDH9	Q9ULB4	789 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	MMP17	Q9ULZ9	603 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	PCDHB13	Q9Y5F0	798 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	NUP205	Q92621	2012 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	PLXND1	Q9Y4D7	1925 aa		11.94	□□□□□ -0.5
PTPN7-204	ENST00000462815	IGF2R	P11717	2491 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815		A0A0A0MRY4	1105 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	PATE3	B3GLJ2	98 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	RHOBTB1	O94844	696 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	NFATC1	O95644	943 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	CAVIN2	O95810	425 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	OAS1	P00973	400 aa	Known RBP	11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	KRT19	P08727	400 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	TMEM191B	P0C7N4	346 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	HDC	P19113	662 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	BDNF	P23560	247 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	CREB5	Q02930	508 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	KCNB1	Q14721	858 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	ELF2	Q15723	593 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	E2F4	Q16254	413 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	PSAPL1	Q6NUJ1	521 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	ADGRG2	Q8IZP9	1017 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	MYCBPAP	Q8TBZ2	947 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	HPDL	Q96IR7	371 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	ZFR	Q96KR1	1074 aa	Known RBP	11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	MRPL45	Q9BRJ2	306 aa	Known RBP	11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	TPSD1	Q9BZJ3	242 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	PANK4	Q9NVE7	773 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	INVS	Q9Y283	1065 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	LOC400499	M0QZD8	3231 aa		11.93	□□□□□ -0.5
PTPN7-204	ENST00000462815	VPS37C	A5D8V6	355 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	C4orf47	A7E2U8	309 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	KIAA0391	O15091	583 aa	Known RBP	11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	TGFB1I1	O43294	461 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	CST3	P01034	146 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	IDE	P14735	1019 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	KIR2DL1	P43626	348 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	SLC6A11	P48066	632 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	DGKE	P52429	567 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	SEC13	P55735	322 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	EHHADH	Q08426	723 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	CRY1	Q16526	586 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	C4orf50	Q6ZRC1	276 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	DENND5B	Q6ZUT9	1274 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	FILIP1	Q7Z7B0	1213 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	WDR49	Q8IV35	697 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	FSIP1	Q8NA03	581 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	IL17RC	Q8NAC3	791 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	TSTD1	Q8NFU3	115 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	ANKRD36BP1	Q96IX9	119 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	C8orf48	Q96LL4	319 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	USP28	Q96RU2	1077 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	FNBP1	Q96RU3	617 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	DPEP3	Q9H4B8	488 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	HSPBP1	Q9NZL4	362 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	HCN2	Q9UL51	889 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815	ABCA7	Q8IZY2	2146 aa		11.92	□□□□□ -0.5
PTPN7-204	ENST00000462815		F8VP50	259 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	SGK1	O00141	431 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	ADAM23	O75077	832 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	TACC1	O75410	805 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	PROS1	P07225	676 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	PDGFRB	P09619	1106 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	SYT1	P21579	422 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	EIF2D	P41214	584 aa	Known RBP	11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	P2RY2	P41231	377 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	MYO1E	Q12965	1108 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	SLC39A14	Q15043	492 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	DHCR24	Q15392	516 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	C2orf27A	Q580R0	203 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	ANO7	Q6IWH7	933 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	CNNM4	Q6P4Q7	775 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	RHBDF2	Q6PJF5	856 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	CCDC73	Q6ZRK6	1079 aa		11.91	□□□□□ -0.5
PTPN7-204	ENST00000462815	TRAPPC11	Q7Z392	1133 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms