RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 ARMCX6Q7L4S7 300 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 PGBD3Q8N328 593 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
PCCB-203ENST00000462542 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 CAPN10Q9HC96 672 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 DDX43Q9NXZ2 648 aaKnown RBP12.51□□□□□ -0.41
PCCB-203ENST00000462542 EHD2Q9NZN4 543 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 GTF3C4Q9UKN8 822 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
PCCB-203ENST00000462542 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 GON4LQ3T8J9 2241 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
PCCB-203ENST00000462542 CACNA1EQ15878 2313 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 C2orf78A6NCI8 922 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 K7ENM7 598 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 SGK1O00141 431 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 LEFTY2O00292 366 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 FAM13AO94988 1023 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 CD59P13987 128 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCCB-203ENST00000462542 PCSK1P29120 753 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 TIE1P35590 1138 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 MAGEA11P43364 429 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 ZNF131P52739 623 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 FAM193AP78312 1265 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 SCAPQ12770 1279 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 POSTNQ15063 836 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 DHCR24Q15392 516 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 TRMT11Q7Z4G4 463 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 PDCL2Q8N4E4 241 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 MINDY1Q8N5J2 469 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 FRMD1Q8N878 549 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 CACTINQ8WUQ7 758 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 HMGB4Q8WW32 186 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 ADAMTS14Q8WXS8 1223 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 SPATA17Q96L03 361 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 PLIN2Q99541 437 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
PCCB-203ENST00000462542 TNRC6BQ9UPQ9 1833 aaKnown RBP12.5□□□□□ -0.41
PCCB-203ENST00000462542 PLXND1Q9Y4D7 1925 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 A0A1W2PQD8 194 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
PCCB-203ENST00000462542 ADH1CP00326 375 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 CYP17A1P05093 508 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 KIR2DL1P43626 348 aaPredicted RBP12.49□□□□□ -0.41
PCCB-203ENST00000462542 SLC6A11P48066 632 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 SLC7A9P82251 487 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 RPL6Q02878 288 aaKnown RBP12.49□□□□□ -0.41
PCCB-203ENST00000462542 ZNF33AQ06730 810 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
PCCB-203ENST00000462542 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 LRRC52Q8N7C0 313 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 PKMYT1Q99640 499 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 FAM124BQ9H5Z6 455 aaPredicted RBP12.49□□□□□ -0.41
PCCB-203ENST00000462542 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 GDAP2Q9NXN4 497 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 L1RE1Q9UN81 338 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
PCCB-203ENST00000462542 TCRBV21S2A2A0A5A6 115 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 ADAM23O75077 832 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 ZNF217O75362 1048 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 ZXDBP98169 803 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 RESTQ13127 1097 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 COL28A1Q2UY09 1125 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 EMC10Q5UCC4 262 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 ARL6IP4Q66PJ3 421 aaKnown RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 FAM171BQ6P995 826 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
PCCB-203ENST00000462542 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
PCCB-203ENST00000462542 GPBP1Q86WP2 473 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms