RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CLDN10P78369 228 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 ZXDBP98169 803 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 RUNX3Q13761 415 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 MTF1Q14872 753 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 MAPRE1Q15691 268 aaKnown RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 ZNF77Q15935 545 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 ITPRIPL2Q3MIP1 535 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 ZACNQ401N2 412 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 ZC3H14Q6PJT7 736 aaKnown RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 VSTM1Q6UX27 236 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 DENND5BQ6ZUT9 1274 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 SV2AQ7L0J3 742 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 RALGPS2Q86X27 583 aaPredicted RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 SUMF1Q8NBK3 374 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 B3GALNT2Q8NCR0 500 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 KCNK16Q96T55 309 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 FBRSL1Q9HCM7 1045 aaKnown RBP16.52■□□□□ 0.24
NUP50-213ENST00000461437 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
NUP50-213ENST00000461437 SDK1Q7Z5N4 2213 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
NUP50-213ENST00000461437 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 MYL1P05976 194 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 CCDC130P13994 396 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 PIK3CAP42336 1068 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 GCLMP48507 274 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 PPP3CAQ08209 521 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 USP4Q13107 963 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 SRSF5Q13243 272 aaKnown RBP16.51■□□□□ 0.23
NUP50-213ENST00000461437 LPAL2Q16609 132 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 PAQR9Q6ZVX9 377 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 MED10Q9BTT4 135 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 WDR87Q6ZQQ6 2873 aa16.51■□□□□ 0.23
NUP50-213ENST00000461437 TRIM66O15016 1216 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 USP17L7P0C7H9 530 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 HDCP19113 662 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 VAMP7P51809 220 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 FOXK2Q01167 660 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 FAM160A1Q05DH4 1040 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 TAF10Q12962 218 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 KCNB1Q14721 858 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 HEATR6Q6AI08 1181 aaKnown RBP16.5■□□□□ 0.23
NUP50-213ENST00000461437 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
NUP50-213ENST00000461437 KIAA2013Q8IYS2 634 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 ATRIPQ8WXE1 791 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 NELL1Q92832 810 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
NUP50-213ENST00000461437 TWNKQ96RR1 684 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 RNF38Q9H0F5 515 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 LINC00597Q9H2U6 94 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 VRTNQ9H8Y1 702 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 KIF9Q9HAQ2 790 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 APOBEC3GQ9HC16 384 aaKnown RBP16.5■□□□□ 0.23
NUP50-213ENST00000461437 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 ZSCAN32Q9NX65 697 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 DUS2Q9NX74 493 aaKnown RBP16.5■□□□□ 0.23
NUP50-213ENST00000461437 SMPD4Q9NXE4 827 aa16.5■□□□□ 0.23
NUP50-213ENST00000461437 ANTXRLA6NF34 631 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 BEST1O76090 585 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 EGFP01133 1207 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 ASPAP45381 313 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 CXCL12P48061 93 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 FNTBP49356 437 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 NDST1P52848 882 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 AP3M2P53677 418 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 MLLT6P55198 1093 aaPredicted RBP16.49■□□□□ 0.23
NUP50-213ENST00000461437 CCINQ13939 588 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 LRRC32Q14392 662 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 BECN1Q14457 450 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
NUP50-213ENST00000461437 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 FMR1NBQ8N0W7 255 aaPredicted RBP16.49■□□□□ 0.23
NUP50-213ENST00000461437 GUF1Q8N442 669 aaKnown RBP16.49■□□□□ 0.23
NUP50-213ENST00000461437 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 SCAMP5Q8TAC9 235 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 TAS1R2Q8TE23 839 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 MSANTD3Q96H12 275 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 C8orf48Q96LL4 319 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 TTLL2Q9BWV7 592 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 TRPM5Q9NZQ8 1165 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 ZMYM5Q9UJ78 669 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 SPAG17Q6Q759 2223 aa16.49■□□□□ 0.23
NUP50-213ENST00000461437 FRYLO94915 3013 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ZNF840PA6NDX5 716 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 LILRB5O75023 590 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
NUP50-213ENST00000461437 GJA4P35212 333 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 IFNAR2P48551 515 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms