RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 USP4Q13107 963 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 ZNF77Q15935 545 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 FAM171BQ6P995 826 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 VSTM1Q6UX27 236 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 HS2ST1Q7LGA3 356 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 TRAPPC11Q7Z392 1133 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 SH3RF2Q8TEC5 729 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 GAB3Q8WWW8 586 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 CD101Q93033 1021 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 CRTAC1Q9NQ79 661 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 AGPAT3Q9NRZ7 376 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
COL16A1-206ENST00000461217 GPR179Q6PRD1 2367 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 DMXL1Q9Y485 3027 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 CLIC2O15247 247 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 HDCP19113 662 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 HOXD13P35453 343 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 NDUFA8P51970 172 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 NR1H3Q13133 447 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 FBXO43Q4G163 708 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 NAIF1Q69YI7 327 aaPredicted RBP16.13■□□□□ 0.17
COL16A1-206ENST00000461217 CAVIN1Q6NZI2 390 aaKnown RBP16.13■□□□□ 0.17
COL16A1-206ENST00000461217 DENND5BQ6ZUT9 1274 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 OR6B3Q8NGW1 331 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 ZNF507Q8TCN5 953 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 SPATA17Q96L03 361 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 HHIPQ96QV1 700 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 CGRRF1Q99675 332 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 TRPM5Q9NZQ8 1165 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 UBE4BO95155 1302 aa16.13■□□□□ 0.17
COL16A1-206ENST00000461217 TRIM66O15016 1216 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 AXIN1O15169 862 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 FOXD2O60548 495 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 LETM1O95202 739 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 ABL1P00519 1130 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 KCNA4P22459 653 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 TRPC3Q13507 836 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 WDR72Q3MJ13 1102 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 AASDHQ4L235 1098 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 UNC13DQ70J99 1090 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 CACNA2D4Q7Z3S7 1137 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 FMR1NBQ8N0W7 255 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 RPLP0P6Q8NHW5 317 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 MYCBPAPQ8TBZ2 947 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 PCED1BQ96HM7 432 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 MRPL45Q9BRJ2 306 aaKnown RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 BLZF1Q9H2G9 400 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 MAGEF1Q9HAY2 307 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 FBRSL1Q9HCM7 1045 aaKnown RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 POLR3BQ9NW08 1133 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 GCNT4Q9P109 453 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
COL16A1-206ENST00000461217 ARHGAP26Q9UNA1 814 aa16.12■□□□□ 0.17
COL16A1-206ENST00000461217 CACNA1AO00555 2505 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CCDC163A0A0D9SF12 145 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 SLC30A4O14863 429 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 POLR2DO15514 142 aaKnown RBP16.11■□□□□ 0.17
COL16A1-206ENST00000461217 TGFB1I1O43294 461 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 PHACTR2O75167 634 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 ZNF202O95125 648 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 NFATC1O95644 943 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CASP1P29466 404 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 USP46P62068 366 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-206ENST00000461217 PSMD6Q15008 389 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CCDC6Q16204 474 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 EML3Q32P44 896 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 LIMS2Q7Z4I7 341 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 KBTBD6Q86V97 674 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CAMKK1Q8N5S9 505 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 ENGASEQ8NFI3 743 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 ACDQ96AP0 544 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 C7orf25Q9BPX7 421 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 NUP62CLQ9H1M0 184 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 ARRDC1-AS1Q9H2J1 176 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 SLC39A2Q9NP94 309 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 NXF1Q9UBU9 619 aaKnown RBP16.11■□□□□ 0.17
COL16A1-206ENST00000461217 FRYLO94915 3013 aa16.11■□□□□ 0.17
COL16A1-206ENST00000461217 A8MXQ7 604 aa16.1■□□□□ 0.17
COL16A1-206ENST00000461217 F8VP50 259 aa16.1■□□□□ 0.17
COL16A1-206ENST00000461217 GDF9O60383 454 aa16.1■□□□□ 0.17
COL16A1-206ENST00000461217 TACC1O75410 805 aa16.1■□□□□ 0.17
COL16A1-206ENST00000461217 CST3P01034 146 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-206ENST00000461217 AFMP43652 599 aa16.1■□□□□ 0.17
COL16A1-206ENST00000461217 SNRPFP62306 86 aaKnown RBP16.1■□□□□ 0.17
COL16A1-206ENST00000461217 CNNM4Q6P4Q7 775 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms