RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 LEFTY2O00292 366 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 MAP3K13O43283 966 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 GJB3O75712 270 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 ALDH1A2O94788 518 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 SERPINF2P08697 491 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 HOXD12P35452 270 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 TIE1P35590 1138 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 GTF2BQ00403 316 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 TSPY1Q01534 308 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 DHCR24Q15392 516 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 DUOXA1Q1HG43 343 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 ZNF423Q2M1K9 1284 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 SV2CQ496J9 727 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 PHTF2Q8N3S3 785 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 GTPBP2Q9BX10 602 aaKnown RBP12.73□□□□□ -0.37
HCFC1-204ENST00000461098 RNF38Q9H0F5 515 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 DNAAF2Q9NVR5 837 aaKnown RBP12.73□□□□□ -0.37
HCFC1-204ENST00000461098 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
HCFC1-204ENST00000461098 HCN2Q9UL51 889 aa12.73□□□□□ -0.37
HCFC1-204ENST00000461098 FLNBO75369 2602 aaKnown RBP12.73□□□□□ -0.37
HCFC1-204ENST00000461098 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
HCFC1-204ENST00000461098 KALRNO60229 2985 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 GABRDO14764 452 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 TRAK2O60296 914 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 KAT7O95251 611 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 CFIP05156 583 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 SCP2P22307 547 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 ADSSP30520 456 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 DPP6P42658 865 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 USP46P62068 366 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 POU5F1Q01860 360 aaKnown RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 KCNB1Q14721 858 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 HSF5Q4G112 596 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 RHBDF2Q6PJF5 856 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 MINDY1Q8N5J2 469 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 CEP76Q8TAP6 659 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
HCFC1-204ENST00000461098 LLPHQ9BRT6 129 aaKnown RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 POLMQ9NP87 494 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-204ENST00000461098 PTPRBP23467 1997 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 SH3BP5O60239 455 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 OPHN1O60890 802 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 ZIC2O95409 532 aaPredicted RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 OLFM2O95897 454 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 EIF2DP41214 584 aaKnown RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 MAGEA11P43364 429 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 SLC7A9P82251 487 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 GFPT1Q06210 699 aaPredicted RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 ADALQ6DHV7 355 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 SLC41A1Q8IVJ1 513 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 PNPLA1Q8N8W4 532 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 C1orf127Q8N9H9 656 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 FSIP1Q8NA03 581 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 SPATA18Q8TC71 538 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 ADAMTS14Q8WXS8 1223 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 SPATA17Q96L03 361 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 PNKPQ96T60 521 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 CD248Q9HCU0 757 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
HCFC1-204ENST00000461098 BCCIPQ9P287 314 aaKnown RBP eCLIP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
HCFC1-204ENST00000461098 APC2O95996 2303 aa12.71□□□□□ -0.38
HCFC1-204ENST00000461098 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 MYMKA6NI61 221 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
HCFC1-204ENST00000461098 AP5Z1O43299 807 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 ATP2C2O75185 946 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 FTH1P19P0C7X4 201 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 PFKLP17858 780 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 GABRG2P18507 467 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
HCFC1-204ENST00000461098 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
HCFC1-204ENST00000461098 PNPLA4P41247 253 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 ATXN3P54252 364 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-204ENST00000461098 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 SOWAHAQ2M3V2 549 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
HCFC1-204ENST00000461098 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-204ENST00000461098 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms