RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 O00370 1275 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 VDRP11473 427 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GJA1P17302 382 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 NPR3P17342 541 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GABRR2P28476 465 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 ADORA2BP29275 332 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 CDC25CP30307 473 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 MFAP3P55082 362 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 HTR4Q13639 388 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 TEAD2Q15562 447 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 RBBP8NLQ8NC74 664 aaPredicted RBP12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 ING5Q8WYH8 240 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.359e-8■■□□□ 14.3
ERGIC3-211ENST00000461043 ZSWIM3Q96MP5 696 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 DUSP16Q9BY84 665 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GPR88Q9GZN0 384 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GANQ9H2C0 597 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 GREB1Q4ZG55 1949 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 RFX1P22670 979 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 FCARP24071 287 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 ANXA13P27216 316 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 WEE1P30291 646 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 KLK7P49862 253 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 SGO2Q562F6 1265 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 STXBP5Q5T5C0 1151 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 NUP93Q8N1F7 819 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 ANKRD52Q8NB46 1076 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 ERGIC2Q96RQ1 377 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 LSM14BQ9BX40 385 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 TRPV4Q9HBA0 871 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 COMMD8Q9NX08 183 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 UXTQ9UBK9 157 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 NCANO14594 1321 aa12.84□□□□□ -0.35
ERGIC3-211ENST00000461043 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 SOBPA7XYQ1 873 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 CALCAP01258 141 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 TPM2P07951 284 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 UCHL3P15374 230 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 SLC5A3P53794 718 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 ZNF445P59923 1031 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 CNGA2Q16280 664 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 TAF12Q16514 161 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 PTPN21Q16825 1174 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 PARM1Q6UWI2 310 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 GPRIN1Q7Z2K8 1008 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 SCAMP5Q8TAC9 235 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 FGF14Q92915 247 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 IGSF9Q9P2J2 1179 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 TSPAN16Q9UKR8 245 aa12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.36
ERGIC3-211ENST00000461043 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 FOXN3O00409 490 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 EPHB6O15197 1021 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 TEX33O43247 280 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 ASGR2P07307 311 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 ZDHHC11BP0C7U3 371 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 KRT5P13647 590 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 CD19P15391 556 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 DDX6P26196 483 aaKnown RBP eCLIP12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 CYP4F8P98187 520 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 UBXN1Q04323 297 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 SYCP1Q15431 976 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 STILQ15468 1287 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 MEA1Q16626 185 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 ARHGAP44Q17R89 818 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 GOLGA7BQ2TAP0 167 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 SNX30Q5VWJ9 437 aa12.82□□□□□ -0.36
ERGIC3-211ENST00000461043 MTSS1LQ765P7 747 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms