RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TM4SF4P48230 202 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 KLRC3Q07444 240 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 BECN1Q14457 450 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 TMEM132BQ14DG7 1078 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SEC23AQ15436 765 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 FIGNQ5HY92 759 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CC2D1AQ6P1N0 951 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SASS6Q6UVJ0 657 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 REXO1L1PQ8IX06 675 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ZZZ3Q8IYH5 903 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CMTR2Q8IYT2 770 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 PIBF1Q8WXW3 757 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ESR2Q92731 530 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CLIP3Q96DZ5 547 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CCDC17Q96LX7 622 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 PAGR1Q9BTK6 254 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF747Q9BV97 191 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 UBA5Q9GZZ9 404 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 DEF6Q9H4E7 631 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 VCPKMTQ9H867 229 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CHST12Q9NRB3 414 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 TMX2Q9Y320 296 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ZDHHC9Q9Y397 364 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 TCAF1Q9Y4C2 921 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ATP23Q9Y6H3 246 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC4A7Q9Y6M7 1214 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 LOC285556D6RIA3 1793 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 COL11A1P12107 1806 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 PARP14Q460N5 1801 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 TMEM232C9JQI7 657 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 SH2B2O14492 632 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 FZD7O75084 574 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF623O75123 536 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CNMDO75829 334 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 REC8O95072 547 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 IL33O95760 270 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 TTLL1O95922 423 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CCDC172P0C7W6 258 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CETPP11597 493 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CASTP20810 708 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 MSNP26038 577 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 EPHA5P54756 1037 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 HMGN5P82970 282 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 TUSC3Q13454 348 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 ACAP2Q15057 778 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 CCDC96Q2M329 555 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 ESRP1Q6NXG1 681 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 FBXO46Q6PJ61 603 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 EPM2AIP1Q7L775 607 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 NCOA7Q8NI08 942 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 NUP133Q8WUM0 1156 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 FAM210AQ96ND0 272 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 NEK1Q96PY6 1258 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 PPP1R9BQ96SB3 815 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 KIAA1683Q9H0B3 1180 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 LY9Q9HBG7 655 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 AS3MTQ9HBK9 375 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 VAT1LQ9HCJ6 419 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 KCNH7Q9NS40 1196 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 KCND1Q9NSA2 647 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 BTBD7Q9P203 1132 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 NYAP2Q9P242 653 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 AGTPBP1Q9UPW5 1226 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 STXBP5LQ9Y2K9 1186 aa5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-203ENST00000460928 PRUNE2Q8WUY3 3088 aa5.4□□□□□ -1.55
ATPAF1-203ENST00000460928 PIEZO1Q92508 2521 aa5.4□□□□□ -1.55
ATPAF1-203ENST00000460928 PLIN4Q96Q06 1357 aa5.4□□□□□ -1.55
ATPAF1-203ENST00000460928 UQCRHLA0A096LP55 91 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 MUSKO15146 869 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 EIF3JO75822 258 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 FLOT1O75955 427 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 PLEKHA8P1O95397 391 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 LARGE1O95461 756 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 UQCRHP07919 91 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ENO2P09104 434 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 TOP1P11387 765 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 LPOP22079 712 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CSF2RBP32927 897 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 NOVP48745 357 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CCT2P78371 535 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 GRIN1Q05586 938 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 SREBF2Q12772 1141 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 TRDNQ13061 729 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 TOB2Q14106 344 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 SKIDA1Q1XH10 827 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 BTBD8Q5XKL5 378 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CD276Q5ZPR3 534 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ZNF585AQ6P3V2 769 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CCDC174Q6PII3 467 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CATSPERGQ6ZRH7 1159 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ANKRD23Q86SG2 305 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms