RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 SPEM1Q8N4L4 309 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 CELF5Q8N6W0 485 aaKnown RBP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 OR10T2Q8NGX3 314 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 SEMA4DQ92854 862 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 SECISBP2LQ93073 1101 aaKnown RBP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 CNOT6LQ96LI5 555 aaKnown RBP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 LRRC3BQ96PB8 259 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 PGLYRP2Q96PD5 576 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 TMEM209Q96SK2 561 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 IMPG2Q9BZV3 1241 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 THAP9Q9H5L6 903 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 VRTNQ9H8Y1 702 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 LMAN1LQ9HAT1 526 aa10.1□□□□□ -0.79
COL6A2-207ENST00000460886 DDX43Q9NXZ2 648 aaKnown RBP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.1□□□□□ -0.79
COL6A2-207ENST00000460886 SYCE3A1L190 88 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 K7ESF4 209 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 GABRDO14764 452 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 HCRTO43612 131 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ASS1P00966 412 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ACAT1P24752 427 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 CTHP32929 405 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 CXCL12P48061 93 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 LHX1P48742 406 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 FMO5P49326 533 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 TUFMP49411 452 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 CDR1P51861 262 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 NOP14P78316 857 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 MYL7Q01449 175 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SMARCB1Q12824 385 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 CCINQ13939 588 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ARHGAP29Q52LW3 1261 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 STXBP5Q5T5C0 1151 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 LAIR1Q6GTX8 287 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 LIMS2Q7Z4I7 341 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ITIH5Q86UX2 942 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 OSTM1Q86WC4 334 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 RALGPS2Q86X27 583 aaPredicted RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SYNPOQ8N3V7 929 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 TTC9BQ8N6N2 239 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ATAD1Q8NBU5 361 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 CCDC150Q8NCX0 1101 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 C2orf15Q8WU43 125 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 TAF4BQ92750 862 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 MRPL45Q9BRJ2 306 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ZCWPW1Q9H0M4 648 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SAMSN1Q9NSI8 373 aaKnown RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 MAGEC2Q9UBF1 373 aaPredicted RBP10.09□□□□□ -0.79
COL6A2-207ENST00000460886 ZMYM5Q9UJ78 669 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 NFE2L3Q9Y4A8 694 aa10.09□□□□□ -0.79
COL6A2-207ENST00000460886 SPTBN2O15020 2390 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SPECC1L-ADORA2AF8WAN1 911 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 TACC1O75410 805 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 AFPP02771 609 aaKnown RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 P4HA1P13674 534 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 ATF6P18850 670 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 WARSP23381 471 aaKnown RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 LMO2P25791 158 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 PCSK1P29120 753 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 CNR2P34972 360 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 GNL1P36915 607 aaPredicted RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 MTIF2P46199 727 aaKnown RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 RAP1GAPP47736 663 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 CDH8P55286 799 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 TSPY1Q01534 308 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SATB1Q01826 763 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 LRRC32Q14392 662 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 ANO6Q4KMQ2 910 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SLC39A12Q504Y0 691 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 DGKKQ5KSL6 1271 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 TXNDC11Q6PKC3 985 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 LRRTM3Q86VH5 581 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 FAM114A1Q8IWE2 563 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SPPL2BQ8TCT7 592 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 CSGALNACT1Q8TDX6 532 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 ACBD6Q9BR61 282 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SDCBP2Q9H190 292 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 SNX25Q9H3E2 840 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 TASP1Q9H6P5 420 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 APOBEC3GQ9HC16 384 aaKnown RBP10.08□□□□□ -0.8
COL6A2-207ENST00000460886 PARD6AQ9NPB6 346 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms