RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 DNAJB7Q7Z6W7 309 aaPredicted RBP14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 CACTINQ8WUQ7 758 aaKnown RBP14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 TCEAL3Q969E4 200 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 GTPBP4Q9BZE4 634 aaKnown RBP14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 SMOC1Q9H4F8 434 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 MAN1B1Q9UKM7 699 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 MAPK8IP1Q9UQF2 711 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 MYO16Q9Y6X6 1858 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 NUP205Q92621 2012 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 FRYQ5TBA9 3013 aa14.63□□□□□ -0.07
SCAMP4-206ENST00000460767 KPNA7A9QM74 516 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 EXOC3O60645 756 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 OBSL1O75147 1896 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 SMC2O95347 1197 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 CAVIN2O95810 425 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 DRD1P21728 446 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 GABRR2P28476 465 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 PNPLA4P41247 253 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 PXNP49023 591 aaPredicted RBP14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 PMS1P54277 932 aaKnown RBP14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 AMPD2Q01433 879 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 FOXC1Q12948 553 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 DUOXA2Q1HG44 320 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 SH3PXD2AQ5TCZ1 1133 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 LMBRD2Q68DH5 695 aaPredicted RBP14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 TRAPPC11Q7Z392 1133 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 OR10T2Q8NGX3 314 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 SPATA18Q8TC71 538 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 XYLT2Q9H1B5 865 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 KIF9Q9HAQ2 790 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 HPS4Q9NQG7 708 aa14.62□□□□□ -0.07
SCAMP4-206ENST00000460767 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 C4orf47A7E2U8 309 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 GABRDO14764 452 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 GIPC1O14908 333 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 CALUO43852 315 aaPredicted RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 RNF40O75150 1001 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 C4BPAP04003 597 aaKnown RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 ODC1P11926 461 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 NR2F2P24468 414 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 RBP5P82980 135 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 RUNX3Q13761 415 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 SV2CQ496J9 727 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 PMS2CLQ68D20 193 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 RDH13Q8NBN7 331 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 TTC8Q8TAM2 541 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 ACDQ96AP0 544 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 ZNF560Q96MR9 790 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 PGLYRP2Q96PD5 576 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 PKMYT1Q99640 499 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 IL21Q9HBE4 155 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 HOOK1Q9UJC3 728 aaKnown RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 AGAP1Q9UPQ3 857 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 NEUROG3Q9Y4Z2 214 aa14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 TIMM13Q9Y5L4 95 aaPredicted RBP14.61□□□□□ -0.07
SCAMP4-206ENST00000460767 PTPRDP23468 1912 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 CYB561D2O14569 222 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 IKBKBO14920 756 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 APBB3O95704 486 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 OR4Q2P0C623 313 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 TMEM191BP0C7N4 346 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 DDX6P26196 483 aaKnown RBP eCLIP14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 AP3M2P53677 418 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 DLG4P78352 724 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 CREB5Q02930 508 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 ZACNQ401N2 412 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 TDRD10Q5VZ19 366 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 WSCD1Q658N2 575 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 OVOS1Q6IE37 1185 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 USP37Q86T82 979 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 PDCL2Q8N4E4 241 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 CSGALNACT2Q8N6G5 542 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 ZCCHC14Q8WYQ9 949 aaKnown RBP14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 ANKRD36BP1Q96IX9 119 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 TMEM9BQ9NQ34 198 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 EVLQ9UI08 416 aaPredicted RBP14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 DSEQ9UL01 958 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 L1RE1Q9UN81 338 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 SPEGQ15772 3267 aa14.6□□□□□ -0.07
SCAMP4-206ENST00000460767 CDX4O14627 284 aaPredicted RBP14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 VNN1O95497 513 aa14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 EGFP01133 1207 aa14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 DLATP10515 647 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 TUFMP49411 452 aaKnown RBP14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 LRRC63Q05C16 580 aa14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 ZNF268Q14587 947 aaPredicted RBP14.59□□□□□ -0.07
SCAMP4-206ENST00000460767 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms