RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TTC25Q96NG3 672 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 PDZD7Q9H5P4 517 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 TNFSF13BQ9Y275 285 aa19.01■□□□□ 0.63
HPS3-202ENST00000460120 MCM3APO60318 1980 aa19■□□□□ 0.63
HPS3-202ENST00000460120 F5H423 210 aaPredicted RBP19■□□□□ 0.63
HPS3-202ENST00000460120 ABHD2P08910 425 aa19■□□□□ 0.63
HPS3-202ENST00000460120 CYP3A5P20815 502 aa19■□□□□ 0.63
HPS3-202ENST00000460120 SLC10A6Q3KNW5 377 aa19■□□□□ 0.63
HPS3-202ENST00000460120 TRNP1Q6NT89 227 aa19■□□□□ 0.63
HPS3-202ENST00000460120 CCDC62Q6P9F0 684 aa19■□□□□ 0.63
HPS3-202ENST00000460120 PPIL6Q8IXY8 311 aa19■□□□□ 0.63
HPS3-202ENST00000460120 KLHL29Q96CT2 875 aa19■□□□□ 0.63
HPS3-202ENST00000460120 OPTNQ96CV9 577 aa19■□□□□ 0.63
HPS3-202ENST00000460120 NGRNQ9NPE2 291 aaKnown RBP19■□□□□ 0.63
HPS3-202ENST00000460120 SIP14410 1827 aa19■□□□□ 0.63
HPS3-202ENST00000460120 WDR90Q96KV7 1748 aa19■□□□□ 0.63
HPS3-202ENST00000460120 H7C0C1 242 aa19■□□□□ 0.63
HPS3-202ENST00000460120 CILPO75339 1184 aa19■□□□□ 0.63
HPS3-202ENST00000460120 PDGFRAP16234 1089 aa19■□□□□ 0.63
HPS3-202ENST00000460120 PHKA2P46019 1235 aa19■□□□□ 0.63
HPS3-202ENST00000460120 ATP5OP48047 213 aa19■□□□□ 0.63
HPS3-202ENST00000460120 ARL4CP56559 192 aa19■□□□□ 0.63
HPS3-202ENST00000460120 TTLL4Q14679 1199 aa19■□□□□ 0.63
HPS3-202ENST00000460120 HHATQ5VTY9 493 aa19■□□□□ 0.63
HPS3-202ENST00000460120 RELL1Q8IUW5 271 aa19■□□□□ 0.63
HPS3-202ENST00000460120 RXFP2Q8WXD0 754 aa19■□□□□ 0.63
HPS3-202ENST00000460120 BCO2Q9BYV7 579 aa19■□□□□ 0.63
HPS3-202ENST00000460120 PHTF1Q9UMS5 762 aa19■□□□□ 0.63
HPS3-202ENST00000460120 SHOC2Q9UQ13 582 aa19■□□□□ 0.63
HPS3-202ENST00000460120 MCF2LO15068 1137 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 CHUKO15111 745 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 HCRTO43612 131 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 LVRNQ6Q4G3 990 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 FAM183BPQ6ZVS7 135 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 BBS12Q6ZW61 710 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 IGDCC3Q8IVU1 814 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 AFG1LQ8WV93 481 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 KCNN1Q92952 543 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 MIS12Q9H081 205 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 ERAP1Q9NZ08 941 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 PSMC3IPQ9P2W1 217 aaPredicted RBP18.99■□□□□ 0.63
HPS3-202ENST00000460120 TSPAN16Q9UKR8 245 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.99■□□□□ 0.63
HPS3-202ENST00000460120 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
HPS3-202ENST00000460120 GAS2O43903 313 aaKnown RBP18.99■□□□□ 0.63
HPS3-202ENST00000460120 ATP6V1G2O95670 118 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 ASMTLO95671 621 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 TRUB2O95900 331 aaKnown RBP18.99■□□□□ 0.63
HPS3-202ENST00000460120 LGALS2P05162 132 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 TMEM132DQ14C87 1099 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 MTFR1Q15390 333 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 ZC3H12AQ5D1E8 599 aaKnown RBP18.99■□□□□ 0.63
HPS3-202ENST00000460120 GLRA4Q5JXX5 417 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 PAFAH2Q99487 392 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 LHX5Q9H2C1 402 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 NOD2Q9HC29 1040 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 RABGEF1Q9UJ41 708 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 EVPLQ92817 2033 aa18.99■□□□□ 0.63
HPS3-202ENST00000460120 PPEF2O14830 753 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 IL18RAPO95256 599 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 FGFR1P11362 822 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 GPD2P43304 727 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 GEMIN4P57678 1058 aaKnown RBP18.98■□□□□ 0.63
HPS3-202ENST00000460120 OVGP1Q12889 678 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 SPARCL1Q14515 664 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 SEPT7Q16181 437 aaKnown RBP18.98■□□□□ 0.63
HPS3-202ENST00000460120 ILDR2Q71H61 639 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 POLNQ7Z5Q5 900 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 ERO1BQ86YB8 467 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.98■□□□□ 0.63
HPS3-202ENST00000460120 KIF12Q96FN5 646 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 PRMT7Q9NVM4 692 aaPredicted RBP18.98■□□□□ 0.63
HPS3-202ENST00000460120 HES2Q9Y543 173 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 SLC25A27O95847 323 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 ADRA1DP25100 572 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 YWHAGP61981 247 aaKnown RBP eCLIP18.98■□□□□ 0.63
HPS3-202ENST00000460120 KRT81Q14533 505 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 ACOT1Q86TX2 421 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 NAT8LQ8N9F0 302 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 LRRC8CQ8TDW0 803 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 APOL6Q9BWW8 343 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 MAGEB5Q9BZ81 275 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 UBN1Q9NPG3 1134 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 L3MBTL1Q9Y468 752 aa18.98■□□□□ 0.63
HPS3-202ENST00000460120 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 KRT16P08779 473 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 GOLGA7BQ2TAP0 167 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 PPP6R3Q5H9R7 873 aaPredicted RBP18.97■□□□□ 0.63
HPS3-202ENST00000460120 SCUBE3Q8IX30 993 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 ANKLE1Q8NAG6 615 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 CFAP36Q96G28 342 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 TMEM237Q96Q45 408 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 FOXP3Q9BZS1 431 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 ZNF408Q9H9D4 720 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 RNF181Q9P0P0 153 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 BRCA1P38398 1863 aaKnown RBP18.97■□□□□ 0.63
HPS3-202ENST00000460120 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms