RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MYADMQ96S97 322 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 HNRNPABQ99729 332 aaKnown RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 PHF7Q9BWX1 381 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 TSPAN16Q9UKR8 245 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 A0A1W2PRU2 124 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 MOSPD3O75425 235 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 NPR3P17342 541 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 SLC5A3P53794 718 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 MAP3K7CLP57077 242 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 CYP4F8P98187 520 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 IFRD2Q12894 506 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 DNAJB7Q7Z6W7 309 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 TRMT2BQ96GJ1 504 aaKnown RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 FAM81BQ96LP2 452 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 CSNK1G1Q9HCP0 422 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 AVENQ9NQS1 362 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 MAGED2Q9UNF1 606 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL18A1-206ENST00000459895 ASB3Q9Y575 518 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
COL18A1-206ENST00000459895 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 M0QYV0 167 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 TULP2O00295 520 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 CSH1P0DML2 217 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 CSH2P0DML3 217 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 VDRP11473 427 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 PTPN2P17706 415 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 GABRR2P28476 465 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 GNA15P30679 374 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-206ENST00000459895 USP8P40818 1118 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 BCAT1P54687 386 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 JAM2P57087 298 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
COL18A1-206ENST00000459895 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-206ENST00000459895 POTEHQ6S545 545 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 GAREM2Q75VX8 874 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 TMEM150AQ86TG1 271 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 LEMD2Q8NC56 503 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 NEK11Q8NG66 645 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 IFNKQ9P0W0 207 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 PRKAG3Q9UGI9 489 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
COL18A1-206ENST00000459895 NCANO14594 1321 aa13.58□□□□□ -0.24
COL18A1-206ENST00000459895 LOC730098B7Z3J9 87 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 CYP26A1O43174 497 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 MICAL2O94851 1124 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 BST2Q10589 180 aaKnown RBP13.57□□□□□ -0.24
COL18A1-206ENST00000459895 TEAD2Q15562 447 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 TAF12Q16514 161 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 FAM71AQ8IYT1 594 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 FGF13Q92913 245 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 GCNAQ96QF7 691 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
COL18A1-206ENST00000459895 A0A1W2PQC6 194 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 C19orf67A6NJJ6 358 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 FOXN3O00409 490 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-206ENST00000459895 THAP12O43422 761 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CFHP08603 1231 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CDC25CP30307 473 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 PBX1P40424 430 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 PDE4CQ08493 712 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 PKDCCQ504Y2 493 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 DENND1BQ6P3S1 775 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 LCLAT1Q6UWP7 414 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 SLC47A2Q86VL8 602 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-206ENST00000459895 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
COL18A1-206ENST00000459895 MYRFLQ96LU7 910 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CEP295NLQ96MC4 621 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 UHRF1Q96T88 793 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-206ENST00000459895 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 XPO4Q9C0E2 1151 aaKnown RBP13.56□□□□□ -0.24
COL18A1-206ENST00000459895 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 RBSNQ9H1K0 784 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 PNPLA8Q9NP80 782 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 EPS15L1Q9UBC2 864 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 HESX1Q9UBX0 185 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 CDH7Q9ULB5 785 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
COL18A1-206ENST00000459895 TICRRQ7Z2Z1 1910 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 XPO1O14980 1071 aaKnown RBP13.55□□□□□ -0.24
COL18A1-206ENST00000459895 GFPT2O94808 682 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms