RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ATP2C2O75185 946 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 LRRN2O75325 713 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 TADA3O75528 432 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 ASS1P00966 412 aaKnown RBP10.66□□□□□ -0.7
HDLBP-228ENST00000459788 TDGF1P13385 188 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 BDNFP23560 247 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 CCNE1P24864 410 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 USP4Q13107 963 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 MTAPQ13126 283 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 BIRC3Q13489 604 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 RUNX3Q13761 415 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 CCINQ13939 588 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 FBXO43Q4G163 708 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 TXNDC8Q6A555 127 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 SCARA3Q6AZY7 606 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 CRYBG2Q8N1P7 616 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 SUMF1Q8NBK3 374 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 RUBCNQ92622 972 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 SLITRK1Q96PX8 696 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 GSDMAQ96QA5 445 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 MRPL45Q9BRJ2 306 aaKnown RBP10.66□□□□□ -0.7
HDLBP-228ENST00000459788 IMPG2Q9BZV3 1241 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 EPC1Q9H2F5 836 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 GKN1Q9NS71 199 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 GCNT4Q9P109 453 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
HDLBP-228ENST00000459788 MAGED2Q9UNF1 606 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-228ENST00000459788 MYO18AQ92614 2054 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 MYOFQ9NZM1 2061 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CCDC163A0A0D9SF12 145 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 TULP1O00294 542 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SLC9A3R1O14745 358 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 STX10O60499 249 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ATG13O75143 517 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 OLFM2O95897 454 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CKMP06732 381 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 KRT13P13646 458 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 DRD1P21728 446 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 NR2F2P24468 414 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 PPP1R2P41236 205 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CXCL12P48061 93 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 GPR15P49685 360 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 TUBP50607 506 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 VAMP7P51809 220 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 PSMC1P62191 440 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SLC7A9P82251 487 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CYP27A1Q02318 531 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CSTF1Q05048 431 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 NR1H3Q13133 447 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 MTF1Q14872 753 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ZNF77Q15935 545 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 TMEM196Q5HYL7 178 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 MDH1BQ5I0G3 518 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ADSSL1Q8N142 457 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 NUP93Q8N1F7 819 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CPA6Q8N4T0 437 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 OSCP1Q8WVF1 389 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SECISBP2LQ93073 1101 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ATP2A3Q93084 1043 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 SMARCD1Q96GM5 515 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 FAM84AQ96KN4 292 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 CYP3A43Q9HB55 503 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 GTSE1Q9NYZ3 720 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 IL37Q9NZH6 218 aa10.65□□□□□ -0.7
HDLBP-228ENST00000459788 NDRG2Q9UN36 371 aaKnown RBP10.65□□□□□ -0.7
HDLBP-228ENST00000459788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-228ENST00000459788 FAM92AA1XBS5 289 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 ZNF840PA6NDX5 716 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 GOLGA6L4A6NEF3 574 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CHURC1-FNTBB4DL54 471 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 F8VP50 259 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 SMC2O95347 1197 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 VNN1O95497 513 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 HDCP19113 662 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CASP4P49662 377 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 FOXK2Q01167 660 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 GRSF1Q12849 480 aaKnown RBP eCLIP10.64□□□□□ -0.71
HDLBP-228ENST00000459788 ADAM9Q13443 819 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CEP135Q66GS9 1140 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 FOXR2Q6PJQ5 311 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 STKLD1Q8NE28 680 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 SPATA20Q8TB22 786 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 B3GNT5Q9BYG0 378 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 DMAP1Q9NPF5 467 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-228ENST00000459788 HPS4Q9NQG7 708 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 NXF1Q9UBU9 619 aaKnown RBP10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CCL26Q9Y258 94 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms