RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 DCTN3O75935 186 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 TPBGLP0DKB5 382 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 RBP3P10745 1247 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 EIF4BP23588 611 aaKnown RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 ALDH3A1P30838 453 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 GMPSP49915 693 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SESN3P58005 492 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 LAMTOR4Q0VGL1 99 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SGSM1Q2NKQ1 1148 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 C15orf59Q2T9L4 293 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 TRNP1Q6NT89 227 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 C1orf228Q6PIY5 440 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 DSTYKQ6XUX3 929 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 RFX8Q6ZV50 586 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 BBS12Q6ZW61 710 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 XYLT1Q86Y38 959 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 TMEM134Q9H6X4 195 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 MANSC1Q9H8J5 431 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 RNPEPL1Q9HAU8 725 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 KCNK13Q9HB14 408 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 PICK1Q9NRD5 415 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 GPATCH2LQ9NWQ4 482 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 CPSF3Q9UKF6 684 aaKnown RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 UGT1A9O60656 530 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 TOM1L1O75674 476 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 PRKCBP05771 671 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 CXCL8P10145 99 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 PYGBP11216 843 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SERPINB3P29508 390 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 PTPN7P35236 360 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SLC18A1P54219 525 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 TNFAIP1Q13829 316 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 CDO1Q16878 200 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 KHDC1Q4VXA5 237 aaKnown RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 NIPA2Q8N8Q9 360 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SPATA18Q8TC71 538 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 CFAP36Q96G28 342 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 MECRQ9BV79 373 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 CADM1Q9BY67 442 aaKnown RBP14.8□□□□□ -0.04
SCFD1-203ENST00000458591 UGT1A7Q9HAW7 530 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 UGT1A10Q9HAW8 530 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 UGT1A8Q9HAW9 530 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 SENP1Q9P0U3 644 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 RGPD3A6NKT7 1758 aaPredicted RBP14.79□□□□□ -0.04
SCFD1-203ENST00000458591 RGPD4Q7Z3J3 1758 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 IGKV6D-21A0A0A0MT36 114 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 TCRBV9S1A1TA0A576 114 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 C2CD2LO14523 706 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 LIN7AO14910 233 aaPredicted RBP14.79□□□□□ -0.04
SCFD1-203ENST00000458591 ARIH2O95376 493 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 CALB2P22676 271 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 CPA2P48052 419 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 YWHAGP61981 247 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCFD1-203ENST00000458591 PTK7Q13308 1070 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 EP400NLQ6ZTU2 488 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 MICAL1Q8TDZ2 1067 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 NLRP4Q96MN2 994 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 MINDY3Q9H8M7 445 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 ARMCX1Q9P291 453 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 PCDHGC3Q9UN70 934 aa14.79□□□□□ -0.04
SCFD1-203ENST00000458591 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 OGTO15294 1046 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 LPXNO60711 386 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MAFO75444 373 aaPredicted RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 ZWINTO95229 277 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MT-ND3P03897 115 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 YY1P25490 414 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 CDH5P33151 784 aaPredicted RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 CES4AQ5XG92 561 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 RINLQ6ZS11 566 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 STK32AQ8WU08 396 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 JDP2Q8WYK2 163 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 INPP5DQ92835 1189 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 NAF1Q96HR8 494 aaKnown RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MRPL4Q9BYD3 311 aaKnown RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MAGEB5Q9BZ81 275 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 ELOVL4Q9GZR5 314 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 SIX4Q9UIU6 781 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 FAM237BA0A1B0GVD1 139 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 SOWAHBA6NEL2 793 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 E7ESA3 106 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 CLGNO14967 610 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 NFICP08651 508 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 IQCF3P0C7M6 154 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 PHBP35232 272 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 CCNG1P51959 295 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 TMEM132AQ24JP5 1023 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 HSDL1Q3SXM5 330 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 SLC45A4Q5BKX6 768 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 MDH1BQ5I0G3 518 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 TREML2Q5T2D2 321 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 DARS2Q6PI48 645 aaKnown RBP14.78□□□□□ -0.04
SCFD1-203ENST00000458591 TSSK1BQ9BXA7 367 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms