RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 ATG16L1Q676U5 607 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 NXNQ6DKJ4 435 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 PCGF5Q86SE9 256 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 ART4Q93070 314 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 SIX2Q9NPC8 291 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 SLC38A7Q9NVC3 462 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 B2RBV5 119 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 UBTFL6P0CB48 400 aaPredicted RBP17.04■□□□□ 0.32
LSS-205ENST00000457828 MRPS35P82673 323 aaKnown RBP17.04■□□□□ 0.32
LSS-205ENST00000457828 RIBC1Q8N443 379 aaPredicted RBP17.04■□□□□ 0.32
LSS-205ENST00000457828 TNIP3Q96KP6 325 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 MYO9BQ13459 2157 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 H3BRJ5 948 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 CST8O60676 142 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
LSS-205ENST00000457828 JAM2P57087 298 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
LSS-205ENST00000457828 ITKQ08881 620 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 MAP7Q14244 749 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 LLGL2Q6P1M3 1020 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 TRIM72Q6ZMU5 477 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
LSS-205ENST00000457828 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 TEKT4Q8WW24 435 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 FGD4Q96M96 766 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 FAM111AQ96PZ2 611 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 NDE1Q9NXR1 346 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 RPTORQ8N122 1335 aa17.04■□□□□ 0.32
LSS-205ENST00000457828 CD4P01730 458 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 DCAF12L1Q5VU92 463 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PCDHB18PQ96TA0 734 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 THTPAQ9BU02 230 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 MANSC1Q9H8J5 431 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 MGRN1O60291 552 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 THOC5Q13769 683 aaKnown RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 PPP1R2P3Q6NXS1 205 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 FITM2Q8N6M3 262 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 HMGCRP04035 888 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PAEPP09466 180 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 SGSM1Q2NKQ1 1148 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 CCDC14Q49A88 953 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 KCNT1Q5JUK3 1230 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 RGS9BPQ6ZS82 235 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 TTC13Q8NBP0 860 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PCDHA2Q9Y5H9 948 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 CYP3A7-CYP3A51PA0A087WV96 503 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 UNC5CO95185 931 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 IL18RAPO95256 599 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 PECAM1P16284 738 aaPredicted RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 CYP3A7P24462 503 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 EIF3EP60228 445 aaKnown RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 MTFR1Q15390 333 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 BZW1Q7L1Q6 419 aaKnown RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 TMEM169Q96HH4 297 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 GRHL1Q9NZI5 618 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 XPO7Q9UIA9 1087 aaKnown RBP17.03■□□□□ 0.32
LSS-205ENST00000457828 NUP98P52948 1817 aa17.03■□□□□ 0.32
LSS-205ENST00000457828 C5orf60A6NFR6 353 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 PIK3R2O00459 728 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 C2CD2LO14523 706 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 PROSCO94903 275 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 PTK7Q13308 1070 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 MAP7D1Q3KQU3 841 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 ZDHHC24Q6UX98 284 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 MCOLN2Q8IZK6 566 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
LSS-205ENST00000457828 RMDN2Q96LZ7 410 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
LSS-205ENST00000457828 CCNG2Q16589 344 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 CLEC16AQ2KHT3 1053 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 CYP4A22Q5TCH4 519 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.32
LSS-205ENST00000457828 TTC39CQ8N584 583 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 SLC26A7Q8TE54 656 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 VCX3AQ9NNX9 186 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 ZDHHC18Q9NUE0 388 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 STXBP5LQ9Y2K9 1186 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.32
LSS-205ENST00000457828 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.32
LSS-205ENST00000457828 ENTPD5O75356 428 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 ITGB3P05106 788 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 SSTR1P30872 391 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 PRKCZQ05513 592 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 BMT2Q1RMZ1 405 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms