RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 HLA-DRAP01903 254 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 TRIM49P0CI25 452 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 TRIM49CP0CI26 452 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 PFKLP17858 780 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 PPP3CCP48454 512 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 MAMSTRQ6ZN01 415 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 SMYD4Q8IYR2 804 aaPredicted RBP18.84■□□□□ 0.61
COL13A1-206ENST00000456019 ELMO3Q96BJ8 720 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 CYP2S1Q96SQ9 504 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 IMPG2Q9BZV3 1241 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 SDCBP2Q9H190 292 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 PRMT8Q9NR22 394 aaPredicted RBP18.84■□□□□ 0.61
COL13A1-206ENST00000456019 GCNT4Q9P109 453 aa18.84■□□□□ 0.61
COL13A1-206ENST00000456019 HOOK1Q9UJC3 728 aaKnown RBP18.84■□□□□ 0.61
COL13A1-206ENST00000456019 MYO15AQ9UKN7 3530 aa18.83■□□□□ 0.61
COL13A1-206ENST00000456019 PTPRDP23468 1912 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 C2orf78A6NCI8 922 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 CLDN5O00501 218 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 HDCP19113 662 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 GCLMP48507 274 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 USP46P62068 366 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 RUNX3Q13761 415 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 MTF1Q14872 753 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 PDGFRLQ15198 375 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 DGKKQ5KSL6 1271 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 ZNF658Q5TYW1 1059 aaPredicted RBP18.83■□□□□ 0.6
COL13A1-206ENST00000456019 TXNDC11Q6PKC3 985 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 ARL14EPQ8N8R7 260 aaPredicted RBP18.83■□□□□ 0.6
COL13A1-206ENST00000456019 TIGD1Q96MW7 591 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 SLC22A12Q96S37 553 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 MED10Q9BTT4 135 aa18.83■□□□□ 0.6
COL13A1-206ENST00000456019 GTPBP4Q9BZE4 634 aaKnown RBP18.83■□□□□ 0.6
COL13A1-206ENST00000456019 KIF26AQ9ULI4 1882 aaPredicted RBP18.82■□□□□ 0.6
COL13A1-206ENST00000456019 VPS13AQ96RL7 3174 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 CETN3O15182 167 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
COL13A1-206ENST00000456019 GTF2H1P32780 548 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 ASPAP45381 313 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 CACNA2D1P54289 1103 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 PPP3CAQ08209 521 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 USP4Q13107 963 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 PPP2R5DQ14738 602 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 PON2Q15165 354 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 ZNF77Q15935 545 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 COBLL1Q53SF7 1204 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 ACOT1Q86TX2 421 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 FAM35AQ86V20 835 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 UNC93AQ86WB7 457 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 RIN3Q8TB24 985 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 SMARCE1Q969G3 411 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 SMARCD1Q96GM5 515 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 SLITRK1Q96PX8 696 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 EBF3Q9H4W6 596 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 HPS4Q9NQG7 708 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 TMEM30AQ9NV96 361 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 ARHGAP26Q9UNA1 814 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 PCDHGA2Q9Y5H1 932 aa18.82■□□□□ 0.6
COL13A1-206ENST00000456019 GREB1Q4ZG55 1949 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 ZNF840PA6NDX5 716 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 KINO60870 393 aaKnown RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 RTN3O95197 1032 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 EPB41P11171 864 aaKnown RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TCF3P15923 654 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 PRCPP42785 496 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 CCR3P51677 355 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 NDST1P52848 882 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 MCCD1P59942 119 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 AMPD2Q01433 879 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TAF10Q12962 218 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 NUP93Q8N1F7 819 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 CRYBG2Q8N1P7 616 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 CCDC150Q8NCX0 1101 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 SPATA20Q8TB22 786 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TAS1R2Q8TE23 839 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 OSCP1Q8WVF1 389 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TSG101Q99816 390 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 FAM126AQ9BYI3 521 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 TMEM8AQ9HCN3 771 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 DMAP1Q9NPF5 467 aaPredicted RBP18.81■□□□□ 0.6
COL13A1-206ENST00000456019 ZSCAN32Q9NX65 697 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 PCDHA5Q9Y5H7 936 aa18.81■□□□□ 0.6
COL13A1-206ENST00000456019 STX10O60499 249 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 ARSAP15289 507 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 YWHAQP27348 245 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 KRT39Q6A163 491 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 TSSK4Q6SA08 328 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 PAQR9Q6ZVX9 377 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 FUKQ8N0W3 1084 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 ADSSL1Q8N142 457 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 SYNPOQ8N3V7 929 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 SPEM1Q8N4L4 309 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 TTC16Q8NEE8 873 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 SH3RF2Q8TEC5 729 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 ATRIPQ8WXE1 791 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 NELL1Q92832 810 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 KCNK16Q96T55 309 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms