RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 RBM15Q96T37 977 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FRMD8P1Q9BZ68 369 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 YIPF3Q9GZM5 350 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 VPS11Q9H270 941 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PAPOLBQ9NRJ5 636 aaKnown RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HSPBP1Q9NZL4 362 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ANKFY1Q9P2R3 1169 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PSMC3IPQ9P2W1 217 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZNF212Q9UDV6 495 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DNAJB4Q9UDY4 337 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SCOCQ9UIL1 159 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HAO1Q9UJM8 370 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ANAPC7Q9UJX3 599 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SCINQ9Y6U3 715 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SIGLEC16A6NMB1 481 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SFI1A8K8P3 1242 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 F8W8V4 182 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ALOX15BO15296 676 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CYP26A1O43174 497 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SMIM24O75264 130 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 STAM2O75886 525 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RGS20O76081 388 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TIMP1P01033 207 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CD4P01730 458 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TGFB3P10600 412 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 UNGP13051 313 aaPredicted RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PLS3P13797 630 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RRM1P23921 792 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ITGB8P26012 769 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TARSP26639 723 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GCAP28676 217 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ABCD1P33897 745 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PHBP35232 272 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GCLMP48507 274 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NCKAP1LP55160 1127 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RPL26P61254 145 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLC34A1Q06495 639 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ARHGAP1Q07960 439 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CBLBQ13191 982 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DNAJC3Q13217 504 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LAMC2Q13753 1193 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KPNB1Q14974 876 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LRRC38Q5VT99 294 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CHSY1Q86X52 802 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 EGFL6Q8IUX8 553 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MCOLN2Q8IZK6 566 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DAW1Q8N136 415 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IL31RAQ8NI17 732 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 AFG1LQ8WV93 481 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 POP1Q99575 1024 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 BTBD10Q9BSF8 475 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FAM167BQ9BTA0 163 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 OSBPL8Q9BZF1 889 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SYNCQ9H7C4 482 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KIAA1586Q9HCI6 787 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IL1RAPL1Q9NZN1 696 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ANGPTL2Q9UKU9 493 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 POLIQ9UNA4 740 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MTO1Q9Y2Z2 717 aaKnown RBP10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLC4A7Q9Y6M7 1214 aa10.51□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SIP14410 1827 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LTBP2Q14767 1821 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 EME2A4GXA9 379 aaPredicted RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FAM155BO75949 473 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HAUS5O94927 633 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MMP3P08254 477 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GNAT1P11488 350 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 EPHB2P29323 1055 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PEX19P40855 299 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DLG4P78352 724 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FPGSQ05932 587 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 AP1B1Q10567 949 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SF3A3Q12874 501 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SNX1Q13596 522 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CCDC6Q16204 474 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLC5A9Q2M3M2 681 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CTC1Q2NKJ3 1217 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KLHL38Q2WGJ6 581 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CEP55Q53EZ4 464 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PCNX4Q63HM2 1172 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 XRRA1Q6P2D8 792 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TMEM154Q6P9G4 183 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FAM47EQ6ZV65 393 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CENPUQ71F23 418 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 OTOAQ7RTW8 1153 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CLNKQ7Z7G1 428 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SDCCAG8Q86SQ7 713 aaPredicted RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLC47A2Q86VL8 602 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RCOR2Q8IZ40 523 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms