RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ZNF286BP0CG31 522 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 KRT4P19013 534 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 CDH6P55285 790 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 SPARCL1Q14515 664 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 FBF1Q8TES7 1133 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 KLHL29Q96CT2 875 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 HPDLQ96IR7 371 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PRKAG3Q9UGI9 489 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 XPO7Q9UIA9 1087 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 CHMP2BQ9UQN3 213 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 KAT6AQ92794 2004 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 IREB2P48200 963 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 ATP11AP98196 1134 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 SWT1Q5T5J6 900 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 C12orf29Q8N999 325 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 NOD2Q9HC29 1040 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 GPATCH2LQ9NWQ4 482 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PHTF1Q9UMS5 762 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 OTOFQ9HC10 1997 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 MCF2LO15068 1137 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 SLC25A27O95847 323 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PHKA2P46019 1235 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 NDST1P52848 882 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 NR1H3Q13133 447 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 GALNTL6Q49A17 601 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 HHATQ5VTY9 493 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 C1orf228Q6PIY5 440 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 TDRPQ86YL5 185 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PALM2Q8IXS6 379 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 EXOC8Q8IYI6 725 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 NAT8LQ8N9F0 302 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 TTC13Q8NBP0 860 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PAFAH2Q99487 392 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 RNF19AQ9NV58 838 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 RABGEF1Q9UJ41 708 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
SEMA4D-213ENST00000455551 A8MUI8 341 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 E5RJQ4 531 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 TRUB2O95900 331 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 NQO1P15559 274 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ARF4P18085 180 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 CYP3A5P20815 502 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 GPD2P43304 727 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 GEMIN4P57678 1058 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 BNIP1Q12981 228 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 TTLL4Q14679 1199 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 SLC10A6Q3KNW5 377 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 SCYL2Q6P3W7 929 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ATP11CQ8NB49 1132 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 DENND1AQ8TEH3 1009 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 FNIP1Q8TF40 1166 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 TMEM132DQ14C87 1099 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 LVRNQ6Q4G3 990 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 LRRC8CQ8TDW0 803 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 RXFP2Q8WXD0 754 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 ALG13Q9NP73 1137 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 UBN1Q9NPG3 1134 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 WDR35Q9P2L0 1181 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 FGFR1P11362 822 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 PDGFRAP16234 1089 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 EFHC2Q5JST6 749 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 FAM183BPQ6ZVS7 135 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 PCGF5Q86SE9 256 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 PPP1R13LQ8WUF5 828 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
SEMA4D-213ENST00000455551 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 H7C0C1 242 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 APOC2P02655 101 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 LGALS2P05162 132 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 ADRA1DP25100 572 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 ATP5OP48047 213 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 AMHR2Q16671 573 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 FAXCQ5TGI0 409 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 IGDCC3Q8IVU1 814 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 FAM49BQ9NUQ9 324 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
SEMA4D-213ENST00000455551 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms