RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TRIM50Q86XT4 487 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 CEP120Q8N960 986 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 RSAD2Q8WXG1 361 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 RMDN2Q96LZ7 410 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 SPATA33Q96N06 139 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 TMEM237Q96Q45 408 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 WDR83Q9BRX9 315 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
ECHDC1-209ENST00000454591 CITO14578 2027 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 C2CD4BA6NLJ0 364 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 GOLGA8SH3BPF8 625 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 MCF2LO15068 1137 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 CHADO15335 359 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 DCTN3O75935 186 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TOMM70O94826 608 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 UNC5CO95185 931 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 KRT15P19012 456 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 MARK3P27448 753 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 GDF10P55107 478 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 EIF3EP60228 445 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PPIL2Q13356 520 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 KCNJ11Q14654 390 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PDK2Q15119 407 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 FNBP1LQ5T0N5 605 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 ANKRD22Q5VYY1 191 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 FBF1Q8TES7 1133 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 DCAKDQ8WVC6 231 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 INPP5DQ92835 1189 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 APBB2Q92870 758 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TBCBQ99426 244 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 VPS11Q9H270 941 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PDZD7Q9H5P4 517 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TXLNGQ9NUQ3 528 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 TJP2Q9UDY2 1190 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 RPL26L1Q9UNX3 145 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 DERAQ9Y315 318 aa13.1□□□□□ -0.31
ECHDC1-209ENST00000454591 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 TMEM63AO94886 807 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 GSTA2P09210 222 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 DHRS4L1P0CG22 281 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 GPD1P21695 349 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 TGM2P21980 687 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 SCNN1AP37088 669 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 DPYSL3Q14195 570 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 KCTD2Q14681 263 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 SLC1A5Q15758 541 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 SLC10A6Q3KNW5 377 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 PKDCCQ504Y2 493 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 JADE1Q6IE81 842 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 CHSY1Q86X52 802 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 TMEM192Q8IY95 271 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 BANPQ8N9N5 519 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 STK32AQ8WU08 396 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 C10orf82Q8WW14 230 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 MMP19Q99542 508 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 SMYD3Q9H7B4 428 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 GRID1Q9ULK0 1009 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
ECHDC1-209ENST00000454591 VGLL3A8MV65 326 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 C2CD2LO14523 706 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 PEX10O60683 326 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 IFNB1P01574 187 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ITGB3P05106 788 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 IQCF3P0C7M6 154 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 RBP3P10745 1247 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms