RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CCDC110Q8TBZ0 833 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 ADAM32Q8TC27 787 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 CYTH4Q9UIA0 394 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 GPD1P21695 349 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 ASPAP45381 313 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 MCL1Q07820 350 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 BIRC2Q13490 618 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SMPD4-213ENST00000454468 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 MROH8Q9H579 483 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 DOCK5Q9H7D0 1870 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 DNALI1O14645 258 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-213ENST00000454468 NEBLO76041 1014 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 ATG7O95352 703 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 KDELR1P24390 212 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 MBTD1Q05BQ5 628 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 STAT4Q14765 748 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 VCPIP1Q96JH7 1222 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 OSBPL7Q9BZF2 842 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
SMPD4-213ENST00000454468 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 CCT8L1PA6NM43 557 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 UBOX5O94941 541 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SCTRP47872 440 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SLC8A3P57103 927 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SESN2P58004 480 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SPATA21Q7Z572 469 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SERPINB12Q96P63 405 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 MAGEB5Q9BZ81 275 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 GCOM2Q9BZD3 368 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 CXCL16Q9H2A7 254 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 SIX4Q9UIU6 781 aa12.52□□□□□ -0.4
SMPD4-213ENST00000454468 A0A0G2JLL6 359 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-213ENST00000454468 DNM1LO00429 736 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 IL18RAPO95256 599 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
SMPD4-213ENST00000454468 DCAF6Q58WW2 860 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 FAM183BPQ6ZVS7 135 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 PRRT2Q7Z6L0 340 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-213ENST00000454468 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
SMPD4-213ENST00000454468 MARCOQ9UEW3 520 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-213ENST00000454468 FAM47DPA6NHR8 397 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 PMM2O15305 246 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 MAGEB2O15479 319 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ASAP2O43150 1006 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 HMGCRP04035 888 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 RPL22P35268 128 aaKnown RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 MMP13P45452 471 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SYDE1Q6ZW31 735 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 HASPINQ8TF76 798 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TLCD1Q96CP7 247 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TRIM33Q9UPN9 1127 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TNFSF13BQ9Y275 285 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CPP00450 1065 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SATB1Q01826 763 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 GHRHRQ02643 423 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CLEC4CQ8WTT0 213 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ROPN1BQ9BZX4 212 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 PDZD7Q9H5P4 517 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ROPN1Q9HAT0 212 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 USP15Q9Y4E8 981 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 POLR2AP24928 1970 aaKnown RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 LSM8O95777 96 aaKnown RBP12.51□□□□□ -0.41
SMPD4-213ENST00000454468 ELK3P41970 407 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CDKN2BP42772 138 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CRADDP78560 199 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 AP1B1Q10567 949 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 BMPR2Q13873 1038 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CYP1B1Q16678 543 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms