RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 TTLL2Q9BWV7 592 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 EBF3Q9H4W6 596 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 MMRN2Q9H8L6 949 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 HPS4Q9NQG7 708 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.46□□□□□ -0.57
LMCD1-205ENST00000454244 PRMT8Q9NR22 394 aaPredicted RBP11.46□□□□□ -0.57
LMCD1-205ENST00000454244 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
LMCD1-205ENST00000454244 TMEM30AQ9NV96 361 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 EHD2Q9NZN4 543 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
LMCD1-205ENST00000454244 ATP8B3O60423 1300 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 LMNAP02545 664 aaKnown RBP11.45□□□□□ -0.58
LMCD1-205ENST00000454244 HDCP19113 662 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 NDST1P52848 882 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
LMCD1-205ENST00000454244 IFRD2Q12894 506 aaPredicted RBP11.45□□□□□ -0.58
LMCD1-205ENST00000454244 TAF10Q12962 218 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 USP4Q13107 963 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ORC1Q13415 861 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 GAS6Q14393 721 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 PDGFRLQ15198 375 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ZNF77Q15935 545 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 EDRF1Q3B7T1 1238 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ZNF528Q3MIS6 628 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ACOT1Q86TX2 421 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ADSSL1Q8N142 457 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 SH3RF2Q8TEC5 729 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
LMCD1-205ENST00000454244 EEF2KMTQ96G04 330 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 IER2Q9BTL4 223 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 RMND1Q9NWS8 449 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 PCDHA5Q9Y5H7 936 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 COL4A2P08572 1712 aa11.45□□□□□ -0.58
LMCD1-205ENST00000454244 CACNA1IQ9P0X4 2223 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ZFHX2Q9C0A1 2572 aaPredicted RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ZNF840PA6NDX5 716 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 OTOL1A6NHN0 477 aaPredicted RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 CETN3O15182 167 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 SMC2O95347 1197 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ABL1P00519 1130 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 CCDC130P13994 396 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 PRCPP42785 496 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ASPAP45381 313 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 IFNAR2P48551 515 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 PDE6CP51160 858 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 CCR3P51677 355 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ENPEPQ07075 957 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 DGKKQ5KSL6 1271 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 Q6ZS52 159 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 PAQR9Q6ZVX9 377 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 UNC93AQ86WB7 457 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 FUKQ8N0W3 1084 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 NUP93Q8N1F7 819 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 TAS1R2Q8TE23 839 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ATRIPQ8WXE1 791 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 SMARCE1Q969G3 411 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 SMARCD1Q96GM5 515 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 SLITRK1Q96PX8 696 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 GSDMAQ96QA5 445 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 KCNK16Q96T55 309 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 IMPG2Q9BZV3 1241 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 TMEM8AQ9HCN3 771 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ZSCAN32Q9NX65 697 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 DUS2Q9NX74 493 aaKnown RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 ARHGAP26Q9UNA1 814 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 WNT6Q9Y6F9 365 aa11.44□□□□□ -0.58
LMCD1-205ENST00000454244 PTPRZ1P23471 2315 aaPredicted RBP11.44□□□□□ -0.58
LMCD1-205ENST00000454244 TICRRQ7Z2Z1 1910 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 AP1G2O75843 785 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 RTN3O95197 1032 aaPredicted RBP11.43□□□□□ -0.58
LMCD1-205ENST00000454244 EPB41P11171 864 aaKnown RBP11.43□□□□□ -0.58
LMCD1-205ENST00000454244 TCF3P15923 654 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 PFKLP17858 780 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 YWHAQP27348 245 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 CXCL12P48061 93 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 PPP3CCP48454 512 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 SATB1Q01826 763 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 PPP2R5DQ14738 602 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 CRYBG2Q8N1P7 616 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 SPEM1Q8N4L4 309 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 CPA6Q8N4T0 437 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 SLC2A14Q8TDB8 520 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 OSCP1Q8WVF1 389 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 NELL1Q92832 810 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 FBXO32Q969P5 355 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 TIGD1Q96MW7 591 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 TWNKQ96RR1 684 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 TSG101Q99816 390 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 ECT2Q9H8V3 914 aa11.43□□□□□ -0.58
LMCD1-205ENST00000454244 CYP3A43Q9HB55 503 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms