RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TRIM66O15016 1216 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 ABL1P00519 1130 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 WARSP23381 471 aaKnown RBP25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 PPP3CCP48454 512 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 SEC13P55735 322 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 TCEAL6Q6IPX3 200 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 CBWD2Q8IUF1 395 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 KBTBD7Q8WVZ9 684 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 TCEAL3Q969E4 200 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 EDEM2Q9BV94 578 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 CRTAC1Q9NQ79 661 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 INVSQ9Y283 1065 aa25.35■■□□□ 1.65
LYSMD2-202ENST00000454181 OBSL1O75147 1896 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 BCLAF3A2AJT9 711 aaKnown RBP25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 LEFTY2O00292 366 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 SLC9A3R1O14745 358 aaPredicted RBP25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 KCNK5O95279 499 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 PMLP29590 882 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 GNL1P36915 607 aaPredicted RBP25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 SLC39A14Q15043 492 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 HS2ST1Q7LGA3 356 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 TTC30AQ86WT1 665 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 WDR49Q8IV35 697 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 MYCBPAPQ8TBZ2 947 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 USP33Q8TEY7 942 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 HSPBP1Q9NZL4 362 aa25.34■■□□□ 1.65
LYSMD2-202ENST00000454181 SYT1P21579 422 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 DAB2IPQ5VWQ8 1189 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 ANO7Q6IWH7 933 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 LIMS2Q7Z4I7 341 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 OR6B3Q8NGW1 331 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 PCED1BQ96HM7 432 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 FNBP1Q96RU3 617 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 TPSD1Q9BZJ3 242 aa25.33■■□□□ 1.65
LYSMD2-202ENST00000454181 PTPRJQ12913 1337 aa25.33■■□□□ 1.64
LYSMD2-202ENST00000454181 ALDH1A2O94788 518 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 DLATP10515 647 aaKnown RBP25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 TNNI1P19237 187 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 OPRD1P41143 372 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 USP46P62068 366 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 AMPD3Q01432 767 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 MDH1BQ5I0G3 518 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 TDRD10Q5VZ19 366 aaKnown RBP25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 TRAPPC11Q7Z392 1133 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 FILIP1Q7Z7B0 1213 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 CCDC33Q8N5R6 958 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 SLITRK1Q96PX8 696 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 USP28Q96RU2 1077 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 TNMDQ9H2S6 317 aa25.32■■□□□ 1.64
LYSMD2-202ENST00000454181 A0A087X0B3 334 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 ZNF840PA6NDX5 716 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 C4orf47A7E2U8 309 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 K7EQS6 105 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 KHNYNO15037 678 aaKnown RBP25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 TNNC1P63316 161 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 SLC7A9P82251 487 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 SHC2P98077 582 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 STK38Q15208 465 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 PSAPL1Q6NUJ1 521 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 KIAA1958Q8N8K9 716 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 RDH13Q8NBN7 331 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 C8orf48Q96LL4 319 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 TTLL2Q9BWV7 592 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 SMPD4Q9NXE4 827 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 CIZ1Q9ULV3 898 aaPredicted RBP25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 CPQQ9Y646 472 aa25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 MORC2Q9Y6X9 1032 aaPredicted RBP25.31■■□□□ 1.64
LYSMD2-202ENST00000454181 F8VP50 259 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 NOVA1P51513 510 aaKnown RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 NOP14P78316 857 aaKnown RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 MRPS21P82921 87 aaKnown RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 PMS2CLQ68D20 193 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 CYP2U1Q7Z449 544 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 HPS3Q969F9 1004 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 CCDC127Q96BQ5 260 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 CNOT6LQ96LI5 555 aaKnown RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 MRPL45Q9BRJ2 306 aaKnown RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 ZSCAN16Q9H4T2 348 aaPredicted RBP25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 MMP17Q9ULZ9 603 aa25.3■■□□□ 1.64
LYSMD2-202ENST00000454181 TACC1O75410 805 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 CYP17A1P05093 508 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 FAM163BP0C2L3 166 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 ASIC1P78348 528 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 IFRD2Q12894 506 aaPredicted RBP25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 TAF10Q12962 218 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 TRPC3Q13507 836 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 CRY1Q16526 586 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 SNRNP35Q16560 246 aaKnown RBP25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 WDR72Q3MJ13 1102 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 DDX42Q86XP3 938 aaKnown RBP eCLIP25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 ADGRG2Q8IZP9 1017 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 GLIS3Q8NEA6 775 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 PNKPQ96T60 521 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 ELOVL4Q9GZR5 314 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 RNF38Q9H0F5 515 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 CFAP97Q9P2B7 532 aa25.29■■□□□ 1.64
LYSMD2-202ENST00000454181 EIF3DO15371 548 aaKnown RBP eCLIP25.28■■□□□ 1.64
LYSMD2-202ENST00000454181 MAP3K13O43283 966 aa25.28■■□□□ 1.64
LYSMD2-202ENST00000454181 CLSTN1O94985 981 aa25.28■■□□□ 1.64
LYSMD2-202ENST00000454181 ADH1CP00326 375 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms