RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 LEFTY2O00292 366 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 SCAMP3O14828 347 aaKnown RBP18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 TCF3P15923 654 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 SYT1P21579 422 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 GRIK1P39086 918 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 CYP27A1Q02318 531 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 MESP2Q0VG99 397 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 MYO1EQ12965 1108 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 ELF2Q15723 593 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 C2orf27AQ580R0 203 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 DPH6Q7L8W6 267 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 USP33Q8TEY7 942 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 ACDQ96AP0 544 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 MRPL45Q9BRJ2 306 aaKnown RBP18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 RNF38Q9H0F5 515 aa18.09■□□□□ 0.49
CR559946.1-201ENST00000453835 ASPMQ8IZT6 3477 aa18.08■□□□□ 0.49
CR559946.1-201ENST00000453835 PTPRDP23468 1912 aa18.08■□□□□ 0.49
CR559946.1-201ENST00000453835 ZNF233A6NK53 670 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 RHOBTB1O94844 696 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 CAVIN2O95810 425 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 CST3P01034 146 aaPredicted RBP18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 TNNC2P02585 160 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 WARSP23381 471 aaKnown RBP18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 GBP1P32455 592 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 NR1H3Q13133 447 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 VSTM1Q6UX27 236 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 DENND5BQ6ZUT9 1274 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 CCDC33Q8N5R6 958 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 TSTD1Q8NFU3 115 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 MMS19Q96T76 1030 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 EDEM2Q9BV94 578 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 HSPBP1Q9NZL4 362 aa18.08■□□□□ 0.48
CR559946.1-201ENST00000453835 ZNF840PA6NDX5 716 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 C4orf47A7E2U8 309 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 GIPC1O14908 333 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 NFATC1O95644 943 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 CYP17A1P05093 508 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 HNRNPLP14866 589 aaKnown RBP eCLIP18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 PDCP20941 246 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 BCKDHBP21953 392 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 SLC6A11P48066 632 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 SLC39A14Q15043 492 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 MDH1BQ5I0G3 518 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 ANO7Q6IWH7 933 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 PSAPL1Q6NUJ1 521 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 TRAPPC11Q7Z392 1133 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 CCDC65Q8IXS2 484 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 MYCBPAPQ8TBZ2 947 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 TTLL2Q9BWV7 592 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 SMPD4Q9NXE4 827 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 TRPM5Q9NZQ8 1165 aa18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
CR559946.1-201ENST00000453835 LNP1A1A4G5 178 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 F8VP50 259 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 CHRM1P11229 460 aaPredicted RBP18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 SHC2P98077 582 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 PMS2CLQ68D20 193 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 TMEM92Q6UXU6 159 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 RASSF3Q86WH2 238 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 ADGRG2Q8IZP9 1017 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 RDH13Q8NBN7 331 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 DPEP3Q9H4B8 488 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 CPQQ9Y646 472 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 NUP205Q92621 2012 aa18.06■□□□□ 0.48
CR559946.1-201ENST00000453835 THADAQ6YHU6 1953 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 PATE3B3GLJ2 98 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 KIAA0391O15091 583 aaKnown RBP18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 OLFM2O95897 454 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 ABL1P00519 1130 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 ANXA13P27216 316 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 GNL1P36915 607 aaPredicted RBP18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 SLC7A9P82251 487 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 TAF10Q12962 218 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 DHCR24Q15392 516 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 SURF1Q15526 300 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 MAPRE1Q15691 268 aaKnown RBP18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 E2F4Q16254 413 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 USP39Q53GS9 565 aaKnown RBP18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 HS2ST1Q7LGA3 356 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 C12orf40Q86WS4 652 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 TTC30AQ86WT1 665 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 MDGA1Q8NFP4 955 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 ZDHHC4Q9NPG8 344 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 MMP17Q9ULZ9 603 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 MTMR6Q9Y217 621 aa18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 MORC2Q9Y6X9 1032 aaPredicted RBP18.05■□□□□ 0.48
CR559946.1-201ENST00000453835 ZZEF1O43149 2961 aa18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 MYOFQ9NZM1 2061 aa18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 CLDN5O00501 218 aa18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 TRIM66O15016 1216 aa18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 TGFB1I1O43294 461 aa18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 OAS1P00973 400 aaKnown RBP18.04■□□□□ 0.48
CR559946.1-201ENST00000453835 DLATP10515 647 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms