RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 TRIM61Q5EBN2 209 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 L1TD1Q5T7N2 865 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 SDHAF4Q5VUM1 108 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 SLC23A3Q6PIS1 610 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 DENND5BQ6ZUT9 1274 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 TRMT11Q7Z4G4 463 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 LRRC15Q8TF66 581 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 OTUB2Q96DC9 234 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 PNKPQ96T60 521 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 MRPL44Q9H9J2 332 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 TBC1D14Q9P2M4 693 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 MAGEC2Q9UBF1 373 aaPredicted RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 SNX9Q9Y5X1 595 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 C2orf78A6NCI8 922 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 FAM163BP0C2L3 166 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 ACAT1P24752 427 aaKnown RBP15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 ANXA13P27216 316 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 TNFRSF4P43489 277 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 CDR1P51861 262 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 IRX4P78413 519 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 SURF1Q15526 300 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 SCN4BQ8IWT1 228 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 ADGRG2Q8IZP9 1017 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 PIGKQ92643 395 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 KIF2CQ99661 725 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 LINC00597Q9H2U6 94 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 MSRB2Q9Y3D2 182 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 IGF2RP11717 2491 aa15.28■□□□□ 0.04
LYSMD3-202ENST00000453259 THADAQ6YHU6 1953 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 LEFTY2O00292 366 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 MAP3K13O43283 966 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 SEC24BO95487 1268 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 APODP05090 189 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 CYP17A1P05093 508 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 BCKDHBP21953 392 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 GRIA2P42262 883 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 ACAP1Q15027 740 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 RABEP1Q15276 862 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 SOWAHAQ2M3V2 549 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 GAB4Q2WGN9 574 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 IL17RCQ8NAC3 791 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 STKLD1Q8NE28 680 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 ZCCHC14Q8WYQ9 949 aaKnown RBP15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 ANKRD36BP1Q96IX9 119 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 C8orf48Q96LL4 319 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 PPP4R2Q9NY27 417 aa15.27■□□□□ 0.04
LYSMD3-202ENST00000453259 SPEGQ15772 3267 aa15.27■□□□□ 0.03
LYSMD3-202ENST00000453259 FAM221BA6H8Z2 402 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 SRRM3A6NNA2 597 aaPredicted RBP15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 PATE3B3GLJ2 98 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 AP5Z1O43299 807 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 KAT7O95251 611 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 KRT19P08727 400 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 TXLNAP40222 546 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 SEC13P55735 322 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 RESTQ13127 1097 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 SEMA3BQ13214 749 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 DHCR24Q15392 516 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 LYSMD4Q5XG99 296 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 SLC36A4Q6YBV0 504 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 PIP4P1Q86T03 277 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 DEFB124Q8NES8 71 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 SLITRK1Q96PX8 696 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 PILRBQ9UKJ0 227 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 INVSQ9Y283 1065 aa15.26■□□□□ 0.03
LYSMD3-202ENST00000453259 ASPMQ8IZT6 3477 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ABCA7Q8IZY2 2146 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 E2F8A0AVK6 867 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 OAS1P00973 400 aaKnown RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 TNNC2P02585 160 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 CHRM1P11229 460 aaPredicted RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ENGP17813 658 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 WARSP23381 471 aaKnown RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 GJB2P29033 226 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 GRIK1P39086 918 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 KIR2DL1P43626 348 aaPredicted RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ATXN3P54252 364 aaPredicted RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ZNF423Q2M1K9 1284 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms