RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 LIMK1P53667 647 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 USP46P62068 366 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 CREB5Q02930 508 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-210ENST00000453030 ELF2Q15723 593 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 PLA2G2CQ5R387 149 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 DENND5BQ6ZUT9 1274 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 SYT13Q7L8C5 426 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 CHAMP1Q96JM3 812 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 TPSD1Q9BZJ3 242 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 DUSP15Q9H1R2 295 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-210ENST00000453030 LINC00597Q9H2U6 94 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 ARHGAP26Q9UNA1 814 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 INVSQ9Y283 1065 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 PCDHGA5Q9Y5G8 931 aa12.48□□□□□ -0.41
GARNL3-210ENST00000453030 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ADAMTS9Q9P2N4 1935 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ANTXRLA6NF34 631 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 F8VP50 259 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ABL1P00519 1130 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 WARSP23381 471 aaKnown RBP12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ASIC1P78348 528 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ZXDBP98169 803 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 NR1H3Q13133 447 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 STK38Q15208 465 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 SURF1Q15526 300 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 MAPRE1Q15691 268 aaKnown RBP12.47□□□□□ -0.41
GARNL3-210ENST00000453030 DUOXA2Q1HG44 320 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 C2orf27AQ580R0 203 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 RNF43Q68DV7 783 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 DPH6Q7L8W6 267 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 HS2ST1Q7LGA3 356 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 TSTD1Q8NFU3 115 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
GARNL3-210ENST00000453030 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 MRPL45Q9BRJ2 306 aaKnown RBP12.47□□□□□ -0.41
GARNL3-210ENST00000453030 EDEM2Q9BV94 578 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 SMPD4Q9NXE4 827 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
GARNL3-210ENST00000453030 IGF2RP11717 2491 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 LEFTY2O00292 366 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 TRIM66O15016 1216 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CLSTN1O94985 981 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CYP17A1P05093 508 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 TCF3P15923 654 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 TNNI1P19237 187 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 HOXD13P35453 343 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 OPRD1P41143 372 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 PDE6CP51160 858 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CYP2J2P51589 502 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.41
GARNL3-210ENST00000453030 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-210ENST00000453030 TRAPPC11Q7Z392 1133 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 LIMS2Q7Z4I7 341 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 DHX58Q96C10 678 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 TRIM9Q9C026 710 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 SNX25Q9H3E2 840 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 DPEP3Q9H4B8 488 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 ANGPTL2Q9UKU9 493 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CPQQ9Y646 472 aa12.46□□□□□ -0.41
GARNL3-210ENST00000453030 CLIC2O15247 247 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
GARNL3-210ENST00000453030 RHOBTB1O94844 696 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-210ENST00000453030 CACNA2D1P54289 1103 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 TNNC1P63316 161 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 E2F4Q16254 413 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 GAB4Q2WGN9 574 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 FAM26FQ5R3K3 315 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 SFTPA1Q8IWL2 248 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 CCDC33Q8N5R6 958 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 USP33Q8TEY7 942 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 FNBP1Q96RU3 617 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 CGRRF1Q99675 332 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 TTLL2Q9BWV7 592 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 AGPAT3Q9NRZ7 376 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms