RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CHST7Q9NS84 486 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 COL4A6Q14031 1691 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 TRIP11Q15643 1979 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 ARHGEF15O94989 841 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 RALAP11233 206 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 ATICP31939 592 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 GATMP50440 423 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 CDH8P55286 799 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 OGDHQ02218 1023 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 ZSCAN26Q16670 478 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 LRRC31Q6UY01 552 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 ANKS1BQ7Z6G8 1248 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 EXD1Q8NHP7 514 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 ART4Q93070 314 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 LCMT1Q9UIC8 334 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 R3HDM2Q9Y2K5 976 aaKnown RBP11.29□□□□□ -0.6
PKP4-206ENST00000452162 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
PKP4-206ENST00000452162 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 A0A1B0GUA9 196 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CA3P07451 260 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 ATF7P17544 494 aaPredicted RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 TAP1Q03518 808 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PCBP1Q15365 356 aaKnown RBP eCLIP11.28□□□□□ -0.66e-6■■■■□ 21.3
PKP4-206ENST00000452162 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 ERICH1Q86X53 443 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 ECHDC2Q86YB7 292 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 NPAS4Q8IUM7 802 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 SLC4A11Q8NBS3 891 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 ATG4AQ8WYN0 398 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 MCEEQ96PE7 176 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 RAD9AQ99638 391 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 FAM105AQ9NUU6 356 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CYTH4Q9UIA0 394 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 MSRAQ9UJ68 235 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 MED7O43513 233 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CILPO75339 1184 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 TCF4P15884 667 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PMS2P54278 862 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 KRT17Q04695 432 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 SNX1Q13596 522 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PTK6Q13882 451 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 RAB30Q15771 203 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 LRRC38Q5VT99 294 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 NOTUMQ6P988 496 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 FAM43BQ6ZT52 329 aaPredicted RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 RNF169Q8NCN4 708 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 LPPQ93052 612 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 OSBPL8Q9BZF1 889 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 ELOVL4Q9GZR5 314 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 PABPC3Q9H361 631 aaKnown RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 CYP3A43Q9HB55 503 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
PKP4-206ENST00000452162 HMGXB4Q9UGU5 601 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 C2CD2Q9Y426 696 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 RALGAPA2Q2PPJ7 1873 aa11.28□□□□□ -0.6
PKP4-206ENST00000452162 TRANK1O15050 2925 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 GOLGA6L10A6NI86 522 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 TP73O15350 636 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 DGKIO75912 1065 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.6
PKP4-206ENST00000452162 NUDT17P0C025 328 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 FGFR1P11362 822 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 CD19P15391 556 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 NR1D1P20393 614 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 AXLP30530 894 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 POLR2BP30876 1174 aaKnown RBP11.27□□□□□ -0.6
PKP4-206ENST00000452162 GRM5P41594 1212 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 IRAK1P51617 712 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.6
PKP4-206ENST00000452162 PPP1R7Q15435 360 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms