RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TSG101Q99816 390 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 ELOVL4Q9GZR5 314 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 LMAN1LQ9HAT1 526 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 THG1LQ9NWX6 298 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 PCDHA5Q9Y5H7 936 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 CACNA1IQ9P0X4 2223 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 PRR23AA6NEV1 266 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 BIN1O00499 593 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 CETN3O15182 167 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 KINO60870 393 aaKnown RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 AP1G2O75843 785 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 ASS1P00966 412 aaKnown RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 USP17L7P0C7H9 530 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 CTHP32929 405 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 ASPAP45381 313 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 MXI1P50539 228 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 MTAPQ13126 283 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 MTF1Q14872 753 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 NFIL3Q16649 462 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 ZNF394Q53GI3 561 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 Q6ZS52 159 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 MON1AQ86VX9 555 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 MAML2Q8IZL2 1156 aaPredicted RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 SLC2A14Q8TDB8 520 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 NKD2Q969F2 451 aaPredicted RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 FBXO32Q969P5 355 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 TNIP3Q96KP6 325 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 SPATA17Q96L03 361 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 KCNK16Q96T55 309 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 HINFPQ9BQA5 517 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 OSBPL6Q9BZF3 934 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 VRTNQ9H8Y1 702 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 KIF9Q9HAQ2 790 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 APOBEC3GQ9HC16 384 aaKnown RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 HPS4Q9NQG7 708 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 SMPD4Q9NXE4 827 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 OBP2AQ9NY56 170 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
USP54-207ENST00000451492 WNT6Q9Y6F9 365 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
USP54-207ENST00000451492 IKBKBO14920 756 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 MAPK13O15264 365 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 HDCP19113 662 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 MAGEA9P43362 315 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 IFNAR2P48551 515 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 SLC5A3P53794 718 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 MAP3K7CLP57077 242 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 TAF10Q12962 218 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 USP4Q13107 963 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 FZD5Q13467 585 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 RUNX3Q13761 415 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 ZNF77Q15935 545 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 EDRF1Q3B7T1 1238 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 WDR44Q5JSH3 913 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 NAIF1Q69YI7 327 aaPredicted RBP10.28□□□□□ -0.76
USP54-207ENST00000451492 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 ZC3H14Q6PJT7 736 aaKnown RBP10.28□□□□□ -0.76
USP54-207ENST00000451492 C12orf29Q8N999 325 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 SCAMP5Q8TAC9 235 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 TAF4BQ92750 862 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 SMARCD1Q96GM5 515 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 C8orf48Q96LL4 319 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 MYRFLQ96LU7 910 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 NELL2Q99435 816 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 NIF3L1Q9GZT8 377 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 C8orf33Q9H7E9 229 aaPredicted RBP10.28□□□□□ -0.76
USP54-207ENST00000451492 TMEM8AQ9HCN3 771 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 DMAP1Q9NPF5 467 aaPredicted RBP10.28□□□□□ -0.76
USP54-207ENST00000451492 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
USP54-207ENST00000451492 ZMYM5Q9UJ78 669 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 MAN1B1Q9UKM7 699 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 CTNND2Q9UQB3 1225 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 CPQQ9Y646 472 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 EML5Q05BV3 1969 aa10.28□□□□□ -0.76
USP54-207ENST00000451492 OTOL1A6NHN0 477 aaPredicted RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 BEST1O76090 585 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 IRF1P10914 325 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 CHRNB1P11230 501 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 YWHAQP27348 245 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 WEE1P30291 646 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 RPS9P46781 194 aaKnown RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 SATB1Q01826 763 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms