RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 RAB27AP51159 221 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 BCAT1P54687 386 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 KRT17Q04695 432 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 BST2Q10589 180 aaKnown RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 UAP1Q16222 522 aaPredicted RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 HADHQ16836 314 aaKnown RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 ATL2Q8NHH9 583 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 ASNSD1Q9NWL6 643 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 VPS18Q9P253 973 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 BRCA2P51587 3418 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 GABRDO14764 452 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 PAPSS1O43252 624 aaPredicted RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 TJP3O95049 919 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 ADORA2BP29275 332 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 PCK1P35558 622 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 RPL34P49207 117 aaKnown RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 SLC6A3Q01959 620 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 PPP1R7Q15435 360 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 TERF2Q15554 542 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 KAZNQ674X7 775 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 LHX8Q68G74 356 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 SYDE1Q6ZW31 735 aaPredicted RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 FBXO25Q8TCJ0 367 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 GRK7Q8WTQ7 553 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 RXFP2Q8WXD0 754 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 KHSRPQ92945 711 aaKnown RBP eCLIP18.61■□□□□ 0.57
LMNA-208ENST00000448611 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 TXLNGYQ9BZA5 131 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 DNAI2Q9GZS0 605 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 ZWILCHQ9H900 591 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
LMNA-208ENST00000448611 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
LMNA-208ENST00000448611 A0A0U1RQF3 1178 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 MOXD2PA6NHM9 499 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 RNF8O76064 485 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 MIPP30301 263 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 SCNN1GP51170 649 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 CLCNKBP51801 687 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 PLTPP55058 493 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 SNX16P57768 344 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 PTK6Q13882 451 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 TAZQ16635 292 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 SMTNL2Q2TAL5 461 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 ODF2Q5BJF6 829 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 KCNT1Q5JUK3 1230 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 WSCD1Q658N2 575 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 ZDHHC17Q8IUH5 632 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 SLC2A14Q8TDB8 520 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 FAM118BQ9BPY3 351 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 NEU2Q9Y3R4 380 aa18.6■□□□□ 0.57
LMNA-208ENST00000448611 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.6■□□□□ 0.57
LMNA-208ENST00000448611 DPYSL4O14531 572 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 OPA1O60313 960 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 PPFIA2O75334 1257 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 TRUB2O95900 331 aaKnown RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 INHAP05111 366 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 PDGFRAP16234 1089 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 TKTP29401 623 aaKnown RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 GYS2P54840 703 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 TAF5Q15542 800 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 SH3PXD2AQ5TCZ1 1133 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 SCUBE3Q8IX30 993 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 CMASQ8NFW8 434 aaPredicted RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 ART4Q93070 314 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 SENP8Q96LD8 212 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 PCSK1NQ9UHG2 260 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 EFR3BQ9Y2G0 817 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 SQORQ9Y6N5 450 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 CAND2O75155 1236 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 GRAP2O75791 330 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 GAS8O95995 478 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 GRK4P32298 578 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 CCDC14Q49A88 953 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 DRICH1Q6PGQ1 229 aaPredicted RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 SLAIN1Q8ND83 568 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 C3orf58Q8NDZ4 430 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 PEBP4Q96S96 227 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 RUFY1Q96T51 708 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 HNRNPABQ99729 332 aaKnown RBP18.59■□□□□ 0.57
LMNA-208ENST00000448611 ADAM2Q99965 735 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 B3GNT5Q9BYG0 378 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 FAM129AQ9BZQ8 928 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 CYLDQ9NQC7 956 aa18.59■□□□□ 0.57
LMNA-208ENST00000448611 TP73O15350 636 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 LIASO43766 372 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 ATP2C2O75185 946 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 KDELR1P24390 212 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 IVDP26440 423 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 RPL9P32969 192 aaKnown RBP18.58■□□□□ 0.56
LMNA-208ENST00000448611 C15orf59Q2T9L4 293 aaPredicted RBP18.58■□□□□ 0.56
LMNA-208ENST00000448611 RAB6CQ53S08 254 aa18.58■□□□□ 0.56
LMNA-208ENST00000448611 CYP4V2Q6ZWL3 525 aaPredicted RBP18.58■□□□□ 0.56
LMNA-208ENST00000448611 CCDC114Q96M63 670 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms