RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 ZNF148Q9UQR1 794 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 USTQ9Y2C2 406 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 STYXL1Q9Y6J8 313 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 KRT15P19012 456 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 GNAZP19086 355 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 RPA3P35244 121 aaPredicted RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 GJC1P36383 396 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 ARSEP51690 589 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 GJA9P57773 515 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 IGBP1P78318 339 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 BEX3Q00994 111 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 FASTKD3Q14CZ7 662 aaKnown RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 LMBRD2Q68DH5 695 aaPredicted RBP12.01□□□□□ -0.49
GNE-203ENST00000447283 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 PASD1Q8IV76 773 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 LRRC8CQ8TDW0 803 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 TRAPPC12Q8WVT3 735 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 KCNN1Q92952 543 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 RNPEPL1Q9HAU8 725 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 FETUBQ9UGM5 382 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 PCDHB4Q9Y5E5 795 aa12.01□□□□□ -0.49
GNE-203ENST00000447283 THSD7BQ9C0I4 1608 aa12□□□□□ -0.49
GNE-203ENST00000447283 COL1A2P08123 1366 aa12□□□□□ -0.49
GNE-203ENST00000447283 POC1B-GALNT4F8VUJ3 575 aa12□□□□□ -0.49
GNE-203ENST00000447283 KPNA6O60684 536 aa12□□□□□ -0.49
GNE-203ENST00000447283 F2P00734 622 aa12□□□□□ -0.49
GNE-203ENST00000447283 MYL3P08590 195 aa12□□□□□ -0.49
GNE-203ENST00000447283 ZSCAN5DPP0CG00 497 aa12□□□□□ -0.49
GNE-203ENST00000447283 T-ENOLP0DO92 83 aa12□□□□□ -0.49
GNE-203ENST00000447283 KRT10P13645 584 aa12□□□□□ -0.49
GNE-203ENST00000447283 TNNI1P19237 187 aa12□□□□□ -0.49
GNE-203ENST00000447283 GLRA2P23416 452 aa12□□□□□ -0.49
GNE-203ENST00000447283 PAX7P23759 505 aa12□□□□□ -0.49
GNE-203ENST00000447283 SSR1P43307 286 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 NAMPTP43490 491 aa12□□□□□ -0.49
GNE-203ENST00000447283 VCPP55072 806 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 WNT7BP56706 349 aa12□□□□□ -0.49
GNE-203ENST00000447283 GPS1Q13098 491 aa12□□□□□ -0.49
GNE-203ENST00000447283 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
GNE-203ENST00000447283 OASLQ15646 514 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 ZC3H12AQ5D1E8 599 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 GNASQ5JWF2 1037 aa12□□□□□ -0.49
GNE-203ENST00000447283 EFCAB12Q6NXP0 572 aa12□□□□□ -0.49
GNE-203ENST00000447283 TMEM270Q6UE05 265 aa12□□□□□ -0.49
GNE-203ENST00000447283 MFSD7Q6UXD7 560 aa12□□□□□ -0.49
GNE-203ENST00000447283 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
GNE-203ENST00000447283 PRPF31Q8WWY3 499 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 NKD2Q969F2 451 aaPredicted RBP12□□□□□ -0.49
GNE-203ENST00000447283 SLC7A6OSQ96CW6 309 aaPredicted RBP12□□□□□ -0.49
GNE-203ENST00000447283 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
GNE-203ENST00000447283 VPS37BQ9H9H4 285 aa12□□□□□ -0.49
GNE-203ENST00000447283 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
GNE-203ENST00000447283 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 PSMC3IPQ9P2W1 217 aaPredicted RBP12□□□□□ -0.49
GNE-203ENST00000447283 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
GNE-203ENST00000447283 SIP14410 1827 aa12□□□□□ -0.49
GNE-203ENST00000447283 TMEM191CA6NGB0 347 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 PI4K2BG5E9Z4 385 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 PEX11AO75192 247 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 LUC7L3O95232 432 aaKnown RBP11.99□□□□□ -0.49
GNE-203ENST00000447283 KRT1P04264 644 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 ITGAVP06756 1048 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 TMEM191BP0C7N4 346 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 CALB2P22676 271 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 CA4P22748 312 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 MMP8P22894 467 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 TBXAS1P24557 533 aaPredicted RBP11.99□□□□□ -0.49
GNE-203ENST00000447283 TARSP26639 723 aaKnown RBP11.99□□□□□ -0.49
GNE-203ENST00000447283 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
GNE-203ENST00000447283 LIG4P49917 911 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 RASSF2P50749 326 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 SLC1A5Q15758 541 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 ATP13A4Q4VNC1 1196 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 SLC45A4Q5BKX6 768 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 MAP3K21Q5TCX8 1036 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 KAZNQ674X7 775 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 SPOCD1Q6ZMY3 1216 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 CENPUQ71F23 418 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 C4orf33Q8N1A6 199 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 LRRC71Q8N4P6 559 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 FAM13CQ8NE31 585 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 ZNF398Q8TD17 642 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 PCDH9Q9HC56 1237 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 CASP8AP2Q9UKL3 1982 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 TCRBV5S1A1TA0A578 114 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 RRN3P2A6NIE6 340 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 ZWINTO95229 277 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 C22orf31O95567 290 aa11.99□□□□□ -0.49
GNE-203ENST00000447283 PGK1P00558 417 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms