RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CDK17Q00537 523 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 TWF1Q12792 350 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 CLEC16AQ2KHT3 1053 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 LIN9Q5TKA1 542 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 GPR153Q6NV75 609 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 GPRIN1Q7Z2K8 1008 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 DNAAF5Q86Y56 855 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 TMEM139Q8IV31 216 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 CPA5Q8WXQ8 436 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 PPP1R9BQ96SB3 815 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 CDX2Q99626 313 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 LHX5Q9H2C1 402 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 NHEJ1Q9H9Q4 299 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 CSNK1G1Q9HCP0 422 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 TAS2R14Q9NYV8 317 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 CEP83Q9Y592 693 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 DENND4CQ5VZ89 1909 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 SZT2Q5T011 3432 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 A0A087X0T9 212 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 SOWAHDA6NJG2 315 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 TMCO5BA8MYB1 307 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 HHLA1C9JL84 531 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 PIK3R2O00459 728 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 XPO1O14980 1071 aaKnown RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 TRIM66O15016 1216 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 CYP1A1P04798 512 aaPredicted RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 FAM228BP0C875 321 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 POU3F3P20264 500 aaPredicted RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 ANXA13P27216 316 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 TUFMP49411 452 aaKnown RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 PMF1Q6P1K2 205 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 CYP26C1Q6V0L0 522 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 TRIM72Q6ZMU5 477 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCDC149Q6ZUS6 474 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 PIGZQ86VD9 579 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 TMEM35BQ8NCS4 154 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC30A5Q8TAD4 765 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC35F5Q8WV83 523 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 C8orf48Q96LL4 319 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 GUCD1Q96NT3 240 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 CDCA3Q99618 268 aaPredicted RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 BAG1Q99933 345 aaPredicted RBP19■□□□□ 0.63
TRAPPC4-203ENST00000447216 DEF6Q9H4E7 631 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 HSFX1Q9UBD0 423 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 ADAMTS1Q9UHI8 967 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 MAFFQ9ULX9 164 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 OBSL1O75147 1896 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 NOTCH4Q99466 2003 aa19■□□□□ 0.63
TRAPPC4-203ENST00000447216 SSU72P8A0A1W2PR75 194 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 RFPL2O75678 378 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 GABBR2O75899 941 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 LSM8O95777 96 aaKnown RBP18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 GLP2RO95838 553 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 CDH5P33151 784 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 ALDH1A3P47895 512 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC8A3P57103 927 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 RPL10AP62906 217 aaKnown RBP18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 MTMR3Q13615 1198 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 KCNC3Q14003 757 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 MTF1Q14872 753 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 ASTE1Q2TB18 679 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 PPM1LQ5SGD2 360 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 VPS36Q86VN1 386 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 LRRC8AQ8IWT6 810 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 EFHBQ8N7U6 833 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 C12orf76Q8N812 135 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 FEZF2Q8TBJ5 459 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCDC42Q96M95 316 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 PLEKHA4Q9H4M7 779 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 ST7Q9NRC1 585 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 SPTLC3Q9NUV7 552 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 TJP2Q9UDY2 1190 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 ANAPC1Q9H1A4 1944 aa18.99■□□□□ 0.63
TRAPPC4-203ENST00000447216 SPDYE4A6NLX3 237 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCL16O15467 120 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 AKR1B10O60218 316 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 ZMYND10O75800 440 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 C1RP00736 705 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 LRG1P02750 347 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 UNGP13051 313 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 PLA2G4AP47712 749 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 KIF11P52732 1056 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 GFPT1Q06210 699 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 IFRD2Q12894 506 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 PDCLQ13371 301 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 PTPN20Q4JDL3 420 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 C2CD6Q53TS8 623 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 RAD9BQ6WBX8 426 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 TMTC1Q8IUR5 882 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 CPXM1Q96SM3 734 aa18.98■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC38A8A6NNN8 435 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 TNFRSF10BO14763 440 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 LCP1P13796 627 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC5A3P53794 718 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 EPHB3P54753 998 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 ACAD10Q6JQN1 1059 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 SCAMP5Q8TAC9 235 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 HDAC7Q8WUI4 952 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 CASP10Q92851 521 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms