RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CEP170P1Q96L14 293 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 ANKEF1Q9NU02 776 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ANGPTL2Q9UKU9 493 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 GBF1Q92538 1859 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TLDC2A0PJX2 215 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TCEA3O75764 348 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 PSMG1O95456 288 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ASMTLO95671 621 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 VTNP04004 478 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 T-ENOLP0DO92 83 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 PORP16435 677 aaPredicted RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 MLH1P40692 756 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ADARP55265 1226 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 MRPS6P82932 125 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 WDR72Q3MJ13 1102 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TDRD12Q587J7 1177 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 EFCAB12Q6NXP0 572 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 HS2ST1Q7LGA3 356 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 TMEM40Q8WWA1 233 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 AK8Q96MA6 479 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 MMRN2Q9H8L6 949 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 IL23AQ9NPF7 189 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 FAM207AQ9NSI2 230 aaPredicted RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 ETNK2Q9NVF9 386 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 ZDHHC7Q9NXF8 308 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
DDX56-206ENST00000446987 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
DDX56-206ENST00000446987 RSPH10B2B2RC85 870 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 E9PMD0 336 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 H0Y3Z8 333 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 ENTPD5O75356 428 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 GPR32O75388 356 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 RSPH10BP0C881 870 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 PDE1BQ01064 536 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 GSTM4Q03013 218 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 PPARDQ03181 441 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 GRM2Q14416 872 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 EMC2Q15006 297 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 RCN1Q15293 331 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 KHDC1Q4VXA5 237 aaKnown RBP13.71□□□□□ -0.21
DDX56-206ENST00000446987 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 XKR9Q5GH70 373 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 ZDHHC24Q6UX98 284 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 ACAD11Q709F0 780 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 LBHD1Q9BQE6 289 aaPredicted RBP13.71□□□□□ -0.21
DDX56-206ENST00000446987 AP1M1Q9BXS5 423 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 KIAA1024Q9UPX6 916 aa13.71□□□□□ -0.21
DDX56-206ENST00000446987 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 DDX3XO00571 662 aaKnown RBP eCLIP13.7□□□□□ -0.221e-7■■■■□ 23.6
DDX56-206ENST00000446987 PODXLO00592 558 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 RIPK2O43353 540 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 AP1G1O43747 822 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 CCDC22O60826 627 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 ALDH2P05091 517 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 EPHB2P29323 1055 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 CRABP2P29373 138 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 DR1Q01658 176 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.223e-8■■□□□ 12.6
DDX56-206ENST00000446987 LPIN1Q14693 890 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 SHHQ15465 462 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 SLC45A4Q5BKX6 768 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 DEFB128Q7Z7B8 93 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 CABP7Q86V35 215 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 ADAMTS10Q9H324 1103 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 AGO3Q9H9G7 860 aaKnown RBP13.7□□□□□ -0.22
DDX56-206ENST00000446987 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 HAO1Q9UJM8 370 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
DDX56-206ENST00000446987 CHKBQ9Y259 395 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 PPME1Q9Y570 386 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 TRPV2Q9Y5S1 764 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 F8W8V4 182 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 CAPN9O14815 690 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 KIAA0391O15091 583 aaKnown RBP13.7□□□□□ -0.22
DDX56-206ENST00000446987 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
DDX56-206ENST00000446987 RFC2P35250 354 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 HOXD12P35452 270 aa13.7□□□□□ -0.22
DDX56-206ENST00000446987 SLC18A1P54219 525 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms