RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 P3H1Q32P28 736 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 PKDCCQ504Y2 493 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 C6orf118Q5T5N4 469 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 UBAP2Q5T6F2 1119 aaKnown RBP14.36□□□□□ -0.11
RBM39-216ENST00000444878 PMF1Q6P1K2 205 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 RXFP2Q8WXD0 754 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 HSPH1Q92598 858 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 NKD2Q969F2 451 aaPredicted RBP14.36□□□□□ -0.11
RBM39-216ENST00000444878 IGSF5Q9NSI5 407 aa14.36□□□□□ -0.11
RBM39-216ENST00000444878 SMIM23A6NLE4 172 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 M0QZ92 97 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 KPNA6O60684 536 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 GRAP2O75791 330 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 ACSL3O95573 720 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 ITGAVP06756 1048 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 CTGFP29279 349 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 TAF6P49848 677 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 ARSEP51690 589 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 SNX16P57768 344 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 OASLQ15646 514 aaKnown RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 XKR4Q5GH76 650 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 TTC13Q8NBP0 860 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 CMASQ8NFW8 434 aaPredicted RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 PGM2Q96G03 612 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 PIWIL1Q96J94 861 aaKnown RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 MTG1Q9BT17 334 aaPredicted RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 DPEP3Q9H4B8 488 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 SGK1O00141 431 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 CD48P09326 243 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 PDGFRBP09619 1106 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 GNL1P36915 607 aaPredicted RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 CDO1Q16878 200 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 FAM228AQ86W67 206 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 TRPV1Q8NER1 839 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 ACTL9Q8TC94 416 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 SLC35F5Q8WV83 523 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 TLCD1Q96CP7 247 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 DDX23Q9BUQ8 820 aaKnown RBP14.35□□□□□ -0.11
RBM39-216ENST00000444878 TMEM109Q9BVC6 243 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 CALN1Q9BXU9 219 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 DNAI2Q9GZS0 605 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 KDM4CQ9H3R0 1056 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 GOLGA2P5Q9HBQ8 144 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 GDAP2Q9NXN4 497 aa14.35□□□□□ -0.11
RBM39-216ENST00000444878 RASGRF2O14827 1237 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 ZSCAN5DPP0CG00 497 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 LSP1P33241 339 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
RBM39-216ENST00000444878 TAF5Q15542 800 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 TAZQ16635 292 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 C15orf59Q2T9L4 293 aaPredicted RBP14.34□□□□□ -0.11
RBM39-216ENST00000444878 SV2CQ496J9 727 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 SH3PXD2AQ5TCZ1 1133 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 TRNP1Q6NT89 227 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 HIBCHQ6NVY1 386 aaPredicted RBP14.34□□□□□ -0.11
RBM39-216ENST00000444878 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 RFX6Q8HWS3 928 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 GLIS1Q8NBF1 620 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 APPL2Q8NEU8 664 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 SLC35B2Q8TB61 432 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 KBTBD7Q8WVZ9 684 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 SLC4A5Q9BY07 1137 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
RBM39-216ENST00000444878 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
RBM39-216ENST00000444878 SAE1Q9UBE0 346 aaPredicted RBP14.34□□□□□ -0.11
RBM39-216ENST00000444878 FAM155AB1AL88 458 aaPredicted RBP14.33□□□□□ -0.11
RBM39-216ENST00000444878 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.11
RBM39-216ENST00000444878 SPTLC1O15269 473 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 HCRTO43612 131 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 PRPSAP2O60256 369 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 TTC4O95801 387 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 IFNB1P01574 187 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 ETS1P14921 441 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 DESP17661 470 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 PSMC4P43686 418 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 CDR1P51861 262 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 FCGRTP55899 365 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 GJA9P57773 515 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 MRPS6P82932 125 aaKnown RBP14.33□□□□□ -0.11
RBM39-216ENST00000444878 SLC6A3Q01959 620 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 SOX4Q06945 474 aaPredicted RBP14.33□□□□□ -0.11
RBM39-216ENST00000444878 GPS1Q13098 491 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 MFSD14CQ5VZR4 134 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 OLFML1Q6UWY5 402 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 ARRDC4Q8NCT1 418 aa14.33□□□□□ -0.11
RBM39-216ENST00000444878 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms