RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 SKA1Q96BD8 255 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 MAF1Q9H063 256 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 PPP1R1BQ9UD71 204 aaPredicted RBP19.81■□□□□ 0.76
PMPCB-204ENST00000444457 DCTN4Q9UJW0 460 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 F8W8V4 182 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 PROSCO94903 275 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 CFHP08603 1231 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 ARL2P36404 184 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 CETN2P41208 172 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 RAP1GDS1P52306 607 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 NOMO3P69849 1222 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 TMEM270Q6UE05 265 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 ANKS1BQ7Z6G8 1248 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 PDCD7Q8N8D1 485 aaKnown RBP19.81■□□□□ 0.76
PMPCB-204ENST00000444457 CCDC89Q8N998 374 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 C11orf70Q9BRQ4 267 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 MSTO1Q9BUK6 570 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 TARS2Q9BW92 718 aaKnown RBP19.81■□□□□ 0.76
PMPCB-204ENST00000444457 SSU72Q9NP77 194 aaKnown RBP19.81■□□□□ 0.76
PMPCB-204ENST00000444457 HEY2Q9UBP5 337 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 PCDHB4Q9Y5E5 795 aa19.81■□□□□ 0.76
PMPCB-204ENST00000444457 LDHAP00338 332 aaKnown RBP19.8■□□□□ 0.76
PMPCB-204ENST00000444457 CRABP2P29373 138 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 GNA15P30679 374 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 LIN9Q5TKA1 542 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 IZUMO2Q6UXV1 221 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 TRIM72Q6ZMU5 477 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 APOBEC3FQ8IUX4 373 aaKnown RBP19.8■□□□□ 0.76
PMPCB-204ENST00000444457 PASD1Q8IV76 773 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 SLC7A3Q8WY07 619 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 KLRG1Q96E93 195 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 CGRRF1Q99675 332 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 ECSITQ9BQ95 431 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 MIS12Q9H081 205 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 HOXC10Q9NYD6 342 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 GMEB1Q9Y692 573 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 RARBP10826 455 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 AMPD1P23109 780 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 FSTL1Q12841 308 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 PTP4A2Q12974 167 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 ZNF365Q70YC5 407 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 ABRAQ8N0Z2 381 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 ARHGAP24Q8N264 748 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 DNERQ8NFT8 737 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 FBXO40Q9UH90 709 aa19.8■□□□□ 0.76
PMPCB-204ENST00000444457 R3HDM2Q9Y2K5 976 aaKnown RBP19.8■□□□□ 0.76
PMPCB-204ENST00000444457 A0A0B4J269 797 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 POC1B-GALNT4F8VUJ3 575 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 FZD9O00144 591 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 EDN1P05305 212 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 PABPC4LP0CB38 370 aaKnown RBP19.79■□□□□ 0.76
PMPCB-204ENST00000444457 SETSIPP0DME0 302 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 CNTN2Q02246 1040 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 RASA2Q15283 850 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 ZNF276Q8N554 614 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.79■□□□□ 0.76
PMPCB-204ENST00000444457 NIFKQ9BYG3 293 aaKnown RBP19.79■□□□□ 0.76
PMPCB-204ENST00000444457 CNTNAP2Q9UHC6 1331 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 PSTPIP1O43586 416 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 SPATA31D3P0C874 917 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 ANPEPP15144 967 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 SCNN1BP51168 640 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 NOP14P78316 857 aaKnown RBP19.79■□□□□ 0.76
PMPCB-204ENST00000444457 SPATA31D4Q6ZUB0 917 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 TRIM55Q9BYV6 548 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 OSBPL8Q9BZF1 889 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 DNAJB4Q9UDY4 337 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 ADGRA2Q96PE1 1338 aa19.79■□□□□ 0.76
PMPCB-204ENST00000444457 IGKV6D-21A0A0A0MT36 114 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 TBXAS1P24557 533 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 CDK16Q00536 496 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 ST13P4Q8IZP2 240 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 OR5B17Q8NGF7 314 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 MIPOL1Q8TD10 442 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 PPP2R3CQ969Q6 453 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 PRR11Q96HE9 360 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 VCPIP1Q96JH7 1222 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 MAK16Q9BXY0 300 aaKnown RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 PPCSQ9HAB8 311 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 MRPL47Q9HD33 250 aaKnown RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 CNTN6Q9UQ52 1028 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 AFG3L2Q9Y4W6 797 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 NUB1Q9Y5A7 615 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 A0A0G2JND7 137 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 A0A1W2PPM1 405 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 MAGEC1O60732 1142 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 RALAP11233 206 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 ESRRAP11474 423 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 SERPINB3P29508 390 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 SSTR3P32745 418 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 OVGP1Q12889 678 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 KLF1Q13351 362 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 MAMLD1Q13495 774 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 FAM91A1Q658Y4 838 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 PHF13Q86YI8 300 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 RHOT1Q8IXI2 618 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 CHST13Q8NET6 341 aa19.78■□□□□ 0.76
PMPCB-204ENST00000444457 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
PMPCB-204ENST00000444457 NAT14Q8WUY8 206 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms