RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MICAL2O94851 1124 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 PRAMEF12O95522 483 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 CFHP08603 1231 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 RPL10AP62906 217 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 EXOC3L4Q17RC7 722 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 GBP6Q6ZN66 633 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 SCAMP5Q8TAC9 235 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 SLC22A12Q96S37 553 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 VPS16Q9H269 839 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 KCNK12Q9HB15 430 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 NUMBLQ9Y6R0 609 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 KMT2EQ8IZD2 1858 aa13.63□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM92AA1XBS5 289 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 LRRC10BA6NIK2 292 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 PI4K2BG5E9Z4 385 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 CSH1P0DML2 217 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 CSH2P0DML3 217 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 GRIK1P39086 918 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 ZNF165P49910 485 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SLC5A3P53794 718 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 ZXDBP98169 803 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 IQCEQ6IPM2 695 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 TMEM270Q6UE05 265 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 BHLHA9Q7RTU4 235 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 GPIHBP1Q8IV16 184 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SHC3Q92529 594 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SMARCD1Q96GM5 515 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 KXD1Q9BQD3 176 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SLC46A2Q9BY10 475 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM124BQ9H5Z6 455 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 MAGED2Q9UNF1 606 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-212ENST00000443561 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 TRIM66O15016 1216 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 TEX33O43247 280 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 PTMSP20962 102 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 VEPH1Q14D04 833 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 GOLGA7BQ2TAP0 167 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 TXNDC8Q6A555 127 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 ITIH5Q86UX2 942 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 ELMOD1Q8N336 334 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 LEMD2Q8NC56 503 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 MED10Q9BTT4 135 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 LSM14BQ9BX40 385 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 TRPV4Q9HBA0 871 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 GDE1Q9NZC3 331 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
PDLIM2-212ENST00000443561 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ZNF197O14709 1029 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 PAEPP09466 180 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ZDHHC11BP0C7U3 371 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 NPR3P17342 541 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 VIPR2P41587 438 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 GPR158Q5T848 1215 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 KLHDC7AQ5VTJ3 777 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 VITQ6UXI7 678 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 SLC44A3Q8N4M1 653 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ZSCAN18Q8TBC5 510 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 JAKMIP2Q96AA8 810 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ASIC4Q96FT7 647 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 NAP1L5Q96NT1 182 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 OSER1Q9NX31 292 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 CYTH4Q9UIA0 394 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
PDLIM2-212ENST00000443561 FOXN3O00409 490 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-212ENST00000443561 DCXO43602 365 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms