RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TFCP2L1Q9NZI6 479 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 RABL2AQ9UBK7 228 aaPredicted RBP10.7□□□□□ -0.7
LIN54-202ENST00000442461 PSMD13Q9UNM6 376 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 PHF24Q9UPV7 400 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 COQ9O75208 318 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 PDE9AO76083 593 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 SPRP35270 261 aaPredicted RBP10.7□□□□□ -0.7
LIN54-202ENST00000442461 TAP1Q03518 808 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 SNX17Q15036 470 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 CCNG2Q16589 344 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 TBC1D10BQ4KMP7 808 aaPredicted RBP10.7□□□□□ -0.7
LIN54-202ENST00000442461 NEK10Q6ZWH5 1172 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 APBB2Q92870 758 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 ARHGEF10LQ9HCE6 1279 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
LIN54-202ENST00000442461 V9GYQ6 96 aa10.7□□□□□ -0.7
LIN54-202ENST00000442461 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 MTSS1O43312 755 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 DCXO43602 365 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SORBS3O60504 671 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 TBX10O75333 385 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 RBP3P10745 1247 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SESN2P58004 480 aaPredicted RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 C11orf63Q6NUN7 778 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 NLRX1Q86UT6 975 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 MAF1Q9H063 256 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SLC38A10Q9HBR0 1119 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 TCF7L2Q9NQB0 619 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 LRRC4BQ9NT99 713 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 CHORDC1Q9UHD1 332 aaPredicted RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 RAB26Q9ULW5 256 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 PNPLA6Q8IY17 1366 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 POGZQ7Z3K3 1410 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 FAM237BA0A1B0GVD1 139 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 RALBP11234 206 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SOX11P35716 441 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 FLT3P36888 993 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SMAD1Q15797 465 aaKnown RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 CDO1Q16878 200 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 ACSBG2Q5FVE4 666 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.69□□□□□ -0.7
LIN54-202ENST00000442461 DCUN1D1Q96GG9 259 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 DGCR6LQ9BY27 220 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 FBXO28Q9NVF7 368 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 HSPBP1Q9NZL4 362 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 PAK5Q9P286 719 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 KLHL8Q9P2G9 620 aaPredicted RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 MYL4P12829 197 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 PON1P27169 355 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 CHRNB3Q05901 458 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 BROXQ5VW32 411 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 KRT35Q92764 455 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 RMDN1Q96DB5 314 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 CADM1Q9BY67 442 aaKnown RBP10.69□□□□□ -0.7
LIN54-202ENST00000442461 SEMA6AQ9H2E6 1030 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 EBF3Q9H4W6 596 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 TASP1Q9H6P5 420 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SPATA2Q9UM82 520 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 SHOC2Q9UQ13 582 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
LIN54-202ENST00000442461 ZSCAN9O15535 394 aaPredicted RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 PAMP19021 973 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 EIF4BP23588 611 aaKnown RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 HALP42357 657 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 ATAD3BQ5T9A4 648 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 ABRAXAS1Q6UWZ7 409 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 AMIGO2Q86SJ2 522 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 FAM149B1Q96BN6 582 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SRPK1Q96SB4 655 aaKnown RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 SETDB2Q96T68 719 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 DCDC2Q9UHG0 476 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SLCO1B7G3V0H7 640 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 GNA15P30679 374 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 CDH6P55285 790 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 ITKQ08881 620 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 C15orf59Q2T9L4 293 aaPredicted RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 STX19Q8N4C7 294 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 BHLHE22Q8NFJ8 381 aaPredicted RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 ENKURQ8TC29 256 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 ADPGKQ9BRR6 497 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 PCDHA6Q9UN73 950 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms