RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 CCT7Q99832 543 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 PAIP1Q9H074 479 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 COPS7BQ9H9Q2 264 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 RPL26L1Q9UNX3 145 aaKnown RBP7.86□□□□□ -1.15
HDAC9-214ENST00000441542 ACTL7BQ9Y614 415 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 IVNS1ABPQ9Y6Y0 642 aa7.86□□□□□ -1.15
HDAC9-214ENST00000441542 TRIM49D1C9J1S8 452 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 ZC3H11AO75152 810 aaKnown RBP eCLIP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 AVILO75366 819 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TPPPO94811 219 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SEC24DO94855 1032 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 CYP11B1P15538 503 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 GTF2H1P32780 548 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 VAMP7P51809 220 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TSPY1Q01534 308 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 CD300CQ08708 224 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SHROOM1Q2M3G4 852 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SBK1Q52WX2 424 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM53Q6P2H8 277 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 C16orf46Q6P387 395 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 NUDCD3Q8IVD9 361 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 PPP4R1Q8TF05 950 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 POMGNT1Q8WZA1 660 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 USP13Q92995 863 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 EIF2AK1Q9BQI3 630 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SYT11Q9BT88 431 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 PARVGQ9HBI0 331 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 DDX43Q9NXZ2 648 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SRP68Q9UHB9 627 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 RABL2BQ9UNT1 228 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 KIF1AQ12756 1690 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 DDX60Q8IY21 1712 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TCRBV7S3A2A0A539 114 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 AIM2O14862 343 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SLC16A3O15427 465 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 POLR2MP0CAP2 368 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SMIM18P0DKX4 95 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 GMPRP36959 345 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TMED10P49755 219 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 HSP90AA5PQ58FG0 334 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 MFSD7Q6UXD7 560 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 LPCAT2Q7L5N7 544 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 FASTKD5Q7L8L6 764 aaKnown RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SLC7A5P1Q8MH63 180 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 DCUN1D1Q96GG9 259 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 LRGUKQ96M69 825 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 ZNF512Q96ME7 567 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 PRICKLE1Q96MT3 831 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 SEMA6AQ9H2E6 1030 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 MAN1C1Q9NR34 630 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 GTF3C4Q9UKN8 822 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 TRPC5Q9UL62 973 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-214ENST00000441542 AGTPBP1Q9UPW5 1226 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 AP4B1Q9Y6B7 739 aa7.85□□□□□ -1.15
HDAC9-214ENST00000441542 CLUHO75153 1309 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM150BA6NC51 233 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 PDLIM1O00151 329 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 DNALI1O14645 258 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 NDC80O14777 642 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CFHP08603 1231 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 FDFT1P37268 417 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 ALDH1A3P47895 512 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 PKNOX1P55347 436 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 DMPKQ09013 629 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CCNIQ14094 377 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CRLF3Q8IUI8 442 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 BBOF1Q8ND07 529 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 ZSCAN18Q8TBC5 510 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 SEMA4DQ92854 862 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 KIFC3Q9BVG8 833 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 TRNAU1APQ9NX07 287 aaKnown RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 EURLQ9NYK6 297 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 PLA2G4CQ9UP65 541 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 FAM86B1E9PN63 330 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 FAM86B2P0C5J1 330 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 HOXD12P35452 270 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 ETFBP38117 255 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 NSFP46459 744 aaKnown RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 EIF2B2P49770 351 aaKnown RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 SLC5A3P53794 718 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 QRICH1Q2TAL8 776 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 DNAL1Q4LDG9 190 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 KCNT1Q5JUK3 1230 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 OGFOD2Q6N063 350 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 TMEM214Q6NUQ4 689 aaKnown RBP7.84□□□□□ -1.15
HDAC9-214ENST00000441542 UGT2A3Q6UWM9 527 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 C14orf80Q86SX3 495 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CBWD2Q8IUF1 395 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 CCDC33Q8N5R6 958 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 E2F7Q96AV8 911 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 RAB20Q9NX57 234 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 SENP1Q9P0U3 644 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 SPATA7Q9P0W8 599 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 SOX13Q9UN79 622 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 TJP1Q07157 1748 aa7.84□□□□□ -1.15
HDAC9-214ENST00000441542 A0A088AWK7 358 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms