RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RPS6KA5O75582 802 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CAPNS1P04632 268 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 SLFN14P0C7P3 912 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FGFR1P11362 822 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 GCFC2P16383 781 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 PBX3P40426 434 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FNTBP49356 437 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 NDUFA8P51970 172 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FAM189BP81408 668 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 SP2Q02086 613 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ID3Q02535 119 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ORC2Q13416 577 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CALCRLQ16602 461 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 NKPD1Q17RQ9 610 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 KLHL40Q2TBA0 621 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 GNPTABQ3T906 1256 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 Q4G0T1 1027 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 PRR16Q569H4 304 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 UTP14CQ5TAP6 766 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 RESP18Q5W5W9 173 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ADALQ6DHV7 355 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 LRRC55Q6ZSA7 311 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 GET4Q7L5D6 327 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 DDX53Q86TM3 631 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 NME8Q8N427 588 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FSIP1Q8NA03 581 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 C3orf58Q8NDZ4 430 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ENGASEQ8NFI3 743 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ETNPPLQ8TBG4 499 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 LRRC15Q8TF66 581 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 HDAC7Q8WUI4 952 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 SMG7Q92540 1137 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ISL2Q96A47 359 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CASD1Q96PB1 797 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MMTAG2Q9BU76 263 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 EDEM2Q9BV94 578 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FAM49AQ9H0Q0 323 aaPredicted RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 PIDD1Q9HB75 910 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 KCNMB3Q9NPA1 279 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MAN1C1Q9NR34 630 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MAP3K20Q9NYL2 800 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 ERAP1Q9NZ08 941 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 DDX25Q9UHL0 483 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CEP131Q9UPN4 1083 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 UBIAD1Q9Y5Z9 338 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 LRBAP50851 2863 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MYH9P35579 1960 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FBN2P35556 2912 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 UTP20O75691 2785 aaKnown RBP5.27□□□□□ -1.57
PTPN4-206ENST00000441089 VWA3AA6NCI4 1184 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 C4orf47A7E2U8 309 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 NPIPB6E9PJ23 425 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 MEIS1O00470 390 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 MGEA5O60502 916 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PAPSS2O95340 614 aaPredicted RBP5.26□□□□□ -1.57
PTPN4-206ENST00000441089 BMP15O95972 392 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 MBD3O95983 291 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PFKFB1P16118 471 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CMA1P23946 247 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CCND2P30279 289 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CDC25AP30304 524 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 GSTT1P30711 240 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 MPLP40238 635 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PRPHP41219 470 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 BCAR1P56945 870 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 SPIRE1Q08AE8 756 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 IKZF1Q13422 519 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 TMEM266Q2M3C6 531 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CEP55Q53EZ4 464 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PCNX4Q63HM2 1172 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 ARL6IP4Q66PJ3 421 aaKnown RBP5.26□□□□□ -1.57
PTPN4-206ENST00000441089 KIAA1211LQ6NV74 962 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CAVIN1Q6NZI2 390 aaKnown RBP5.26□□□□□ -1.57
PTPN4-206ENST00000441089 NXPE4Q6UWF7 544 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CYFIP1Q7L576 1253 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 CACNA2D4Q7Z3S7 1137 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PLA2G4DQ86XP0 818 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 SULF2Q8IWU5 870 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 SPEM1Q8N4L4 309 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 GIMAP8Q8ND71 665 aaPredicted RBP5.26□□□□□ -1.57
PTPN4-206ENST00000441089 FEZF2Q8TBJ5 459 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 HNRNPLLQ8WVV9 542 aaKnown RBP5.26□□□□□ -1.57
PTPN4-206ENST00000441089 FGF14Q92915 247 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 EPSTI1Q96J88 318 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 MXRA8Q9BRK3 442 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 SLC32A1Q9H598 525 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 JADE2Q9NQC1 790 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 DACT1Q9NYF0 836 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 KLK13Q9UKR3 277 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PPM1HQ9ULR3 514 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 TCHHQ07283 1943 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 PLXNB3Q9ULL4 1909 aa5.26□□□□□ -1.57
PTPN4-206ENST00000441089 NOTCH4Q99466 2003 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NBASA2RRP1 2371 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NT5C1B-RDH14C9J2C7 533 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 LAD1O00515 517 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 CAPN9O14815 690 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms