RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF528Q3MIS6 628 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 SV2AQ7L0J3 742 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 SMYD4Q8IYR2 804 aaPredicted RBP21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 ATRIPQ8WXE1 791 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 TAF4BQ92750 862 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 ELMO3Q96BJ8 720 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 EBF3Q9H4W6 596 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.13■□□□□ 0.976e-10■■■■■ 108.7
SHROOM1-204ENST00000440118 GKN1Q9NS71 199 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 NME7Q9Y5B8 376 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 MYO16Q9Y6X6 1858 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 SHISA7A6NL88 538 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 CLDN5O00501 218 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 AKAP3O75969 853 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 VNN1O95497 513 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 HLA-DRAP01903 254 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 IFNAR2P48551 515 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 AMPD2Q01433 879 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 MTF1Q14872 753 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 PON2Q15165 354 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 NFIL3Q16649 462 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 TRIM68Q6AZZ1 485 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 ADSSL1Q8N142 457 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 ARL14EPQ8N8R7 260 aaPredicted RBP21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 C8orf48Q96LL4 319 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 SLITRK1Q96PX8 696 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 TSG101Q99816 390 aa21.12■□□□□ 0.97
SHROOM1-204ENST00000440118 C2orf78A6NCI8 922 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 EPB41P11171 864 aaKnown RBP21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 HDCP19113 662 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 GCLMP48507 274 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 CCR3P51677 355 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 USP46P62068 366 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 RUNX3Q13761 415 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 PDGFRLQ15198 375 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 DGKKQ5KSL6 1271 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 TSSK4Q6SA08 328 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 FAM35AQ86V20 835 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 MAML2Q8IZL2 1156 aaPredicted RBP21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 FMR1NBQ8N0W7 255 aaPredicted RBP21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 CPA6Q8N4T0 437 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 SMARCD1Q96GM5 515 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 CYP2S1Q96SQ9 504 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 B3GNT5Q9BYG0 378 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 DNAI2Q9GZS0 605 aa21.11■□□□□ 0.97
SHROOM1-204ENST00000440118 CFAP54Q96N23 3096 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 DMDP11532 3685 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 ASS1P00966 412 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 CHRNB1P11230 501 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 PPP3CCP48454 512 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 NOP14P78316 857 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 FZD5Q13467 585 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 SPOPLQ6IQ16 392 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 TXNDC11Q6PKC3 985 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 ACOT1Q86TX2 421 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 SMARCE1Q969G3 411 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 EXOC4Q96A65 974 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 SLC22A12Q96S37 553 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 FAM83CQ9BQN1 747 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 DMAP1Q9NPF5 467 aaPredicted RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 PRMT8Q9NR22 394 aaPredicted RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 KRT82Q9NSB4 513 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 ZSCAN32Q9NX65 697 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 DUS2Q9NX74 493 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 PCDHGA2Q9Y5H1 932 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 WDR87Q6ZQQ6 2873 aa21.1■□□□□ 0.97
SHROOM1-204ENST00000440118 CETN3O15182 167 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 RTN3O95197 1032 aaPredicted RBP21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 TAF10Q12962 218 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 ORC1Q13415 861 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 EDRF1Q3B7T1 1238 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 NUP93Q8N1F7 819 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 ZNF687Q8N1G0 1237 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 SH3RF2Q8TEC5 729 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 SDCBP2Q9H190 292 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 HPS4Q9NQG7 708 aa21.09■□□□□ 0.97
SHROOM1-204ENST00000440118 EP300Q09472 2414 aaPredicted RBP21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 GVINP1Q7Z2Y8 2422 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 STX10O60499 249 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 AP1G2O75843 785 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ARSAP15289 507 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 PFKLP17858 780 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 YWHAQP27348 245 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ASPAP45381 313 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 NDST1P52848 882 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 CACNA2D1P54289 1103 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 GRSF1Q12849 480 aaKnown RBP eCLIP21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 USP4Q13107 963 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 STIM1Q13586 685 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ZNF77Q15935 545 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ZNF658Q5TYW1 1059 aaPredicted RBP21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 ATP2A3Q93084 1043 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 FBXO32Q969P5 355 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 EEF2KMTQ96G04 330 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 GSDMAQ96QA5 445 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 TTLL2Q9BWV7 592 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 FAM126AQ9BYI3 521 aaPredicted RBP21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 NIF3L1Q9GZT8 377 aa21.08■□□□□ 0.97
SHROOM1-204ENST00000440118 TMEM8AQ9HCN3 771 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms