RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NOP53Q9NZM5 478 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 HEY1Q9Y5J3 304 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 COL11A1P12107 1806 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 CEP350Q5VT06 3117 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 KRT7P08729 469 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ALADP13716 330 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 GM2AP17900 193 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ALDH3A1P30838 453 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CDH6P55285 790 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CEP128Q6ZU80 1094 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 NLRP9Q7RTR0 991 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 C1orf127Q8N9H9 656 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 DNERQ8NFT8 737 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 HEXIM2Q96MH2 286 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF570Q96NI8 536 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 VPS33BQ9H267 617 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ZMYND8Q9ULU4 1186 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 USP18Q9UMW8 372 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ZBTB42B2RXF5 422 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 GPR25O00155 361 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 MAGEB2O15479 319 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 POLR2BP30876 1174 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 RGS7P49802 495 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 KBTBD12Q3ZCT8 623 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 BBS12Q6ZW61 710 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 PRR11Q96HE9 360 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM111AQ96PZ2 611 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF518BQ9C0D4 1074 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ELOVL4Q9GZR5 314 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 TXLNGQ9NUQ3 528 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 SLC24A2Q9UI40 661 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 PCDHGC3Q9UN70 934 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 KBTBD13C9JR72 458 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 MICAL2O94851 1124 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 UPP2O95045 317 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CCND1P24385 295 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 PHBP35232 272 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 IER5Q5VY09 327 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 MPZL3Q6UWV2 235 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 GADL1Q6ZQY3 521 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 PRPF39Q86UA1 669 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CTAGE3PQ8IX95 158 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 NIPA2Q8N8Q9 360 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 SLC4A11Q8NBS3 891 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 SLC7A6OSQ96CW6 309 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 RSRC1Q96IZ7 334 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 SERAC1Q96JX3 654 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 STRIP2Q9ULQ0 834 aa14.18□□□□□ -0.14
HERPUD1-204ENST00000439977 PSME4Q14997 1843 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 CFAP69A5D8W1 941 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 LACTBL1A8MY62 500 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 H7C0C1 242 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ENTPD5O75356 428 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 RNF8O76064 485 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ATP5OP48047 213 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ERFP50548 548 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 TAP1Q03518 808 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 SMAD1Q15797 465 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 EFCAB12Q6NXP0 572 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 METTL7BQ6UX53 244 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 FBXO16Q8IX29 292 aaPredicted RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 DCAKDQ8WVC6 231 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ADPGKQ9BRR6 497 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM167BQ9BTA0 163 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 CDT1Q9H211 546 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ACSS3Q9H6R3 686 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 RPF1Q9H9Y2 349 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 FBXO6Q9NRD1 293 aaPredicted RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 TCRBV9S1A1TA0A576 114 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 MCF2LO15068 1137 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 MT-ND3P03897 115 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 PYGBP11216 843 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ATP2A2P16615 1042 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 RPS12P25398 132 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 AP3M2P53677 418 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 VGLL4Q14135 290 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 JADE1Q6IE81 842 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 TRNP1Q6NT89 227 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 ADGRD1Q6QNK2 874 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 LBX2Q6XYB7 198 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 POLNQ7Z5Q5 900 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 SPATA33Q96N06 139 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 RAB6BQ9NRW1 208 aa14.17□□□□□ -0.14
HERPUD1-204ENST00000439977 SENP1Q9P0U3 644 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms