RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 IRS1P35568 1242 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 SCNN1AP37088 669 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 GABRB2P47870 512 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 CLCN4P51793 760 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-202ENST00000439369 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-202ENST00000439369 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 RAB41Q5JT25 222 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 CCDC122Q5T0U0 273 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 ERICH1Q86X53 443 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 SCML4Q8N228 414 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 C1orf131Q8NDD1 294 aaKnown RBP13.39□□□□□ -0.27
SCLT1-202ENST00000439369 UBA3Q8TBC4 463 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 SLC22A17Q8WUG5 538 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 WDR35Q9P2L0 1181 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 PTPRDP23468 1912 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 ANKRD62A6NC57 917 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 PRRG1O14668 218 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 TGM5O43548 720 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 FBXO21O94952 628 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 POU2F2P09086 479 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 HOXA9P31269 272 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 GRIK1P39086 918 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 DUSP4Q13115 394 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 DUSP6Q16828 381 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 MCOLN2Q8IZK6 566 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 KREMEN2Q8NCW0 462 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 ZMIZ2Q8NF64 920 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 CPA5Q8WXQ8 436 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 TRIM44Q96DX7 344 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 CYP4F11Q9HBI6 524 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-202ENST00000439369 SPTLC3Q9NUV7 552 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 ASB3Q9Y575 518 aa13.38□□□□□ -0.27
SCLT1-202ENST00000439369 F8VP50 259 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ZNF263O14978 683 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 PAPLNO95428 1278 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 SEC24AO95486 1093 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CCDC175P0C221 793 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ALDH1A3P47895 512 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CACNA2D1P54289 1103 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 MTF1Q14872 753 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ZNF697Q5TEC3 545 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ZNF662Q6ZS27 426 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 IRGQQ8WZA9 623 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 C18orf8Q96DM3 657 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 SEPT5Q99719 369 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 SYNCQ9H7C4 482 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TLE6Q9H808 572 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 LRRC4Q9HBW1 653 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CNGB3Q9NQW8 809 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 DZANK1Q9NVP4 752 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 INSL5Q9Y5Q6 135 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 ADGRG1Q9Y653 693 aa13.37□□□□□ -0.27
SCLT1-202ENST00000439369 NCANO14594 1321 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms