RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 CDK4P11802 303 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 S100A1P23297 94 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 CHKAP35790 457 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 PHEXP78562 749 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 PPP1R14CQ8TAE6 165 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 KREMEN1Q96MU8 473 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 RBM15Q96T37 977 aaKnown RBP eCLIP16.47■□□□□ 0.232e-12■□□□□ 8.9
DHFR-201ENST00000439211 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 NAV1Q8NEY1 1877 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 KRT1P04264 644 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TRMT5Q32P41 509 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 DAW1Q8N136 415 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 SEMA4DQ92854 862 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 CLPTM1LQ96KA5 538 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 MIPEPQ99797 713 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TBC1D22BQ9NU19 505 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TTC4O95801 387 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 ASNSP08243 561 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 T-ENOLP0DO92 83 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 VCLP18206 1134 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 FMO1Q01740 532 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 PDCD4Q53EL6 469 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TTC17Q96AE7 1141 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 ARPC5LQ9BPX5 153 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 TRNAU1APQ9NX07 287 aaKnown RBP16.47■□□□□ 0.23
DHFR-201ENST00000439211 PCYOX1Q9UHG3 505 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
DHFR-201ENST00000439211 KIAA1551Q9HCM1 1747 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 C15orf38-AP3S2A0A0A6YYH1 394 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 PIK3CDO00329 1044 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 NPTX2P47972 431 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 RPS6P62753 249 aaKnown RBP16.46■□□□□ 0.23
DHFR-201ENST00000439211 ARPINQ7Z6K5 226 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 CROCCP3Q8IVE0 287 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 GDPD5Q8WTR4 605 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 DMAC2Q9NW81 257 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 KRT10P13645 584 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 LMNB2Q03252 620 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 HIC1Q14526 733 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 FNDC8Q8TC99 324 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 AZIN2Q96A70 460 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 TRPC7Q9HCX4 862 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 TAS2R1Q9NYW7 299 aa16.46■□□□□ 0.23
DHFR-201ENST00000439211 UQCRBP14927 111 aa16.46■□□□□ 0.22
DHFR-201ENST00000439211 PMLP29590 882 aa16.46■□□□□ 0.22
DHFR-201ENST00000439211 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.22
DHFR-201ENST00000439211 DRG2P55039 364 aaKnown RBP16.46■□□□□ 0.22
DHFR-201ENST00000439211 GPS1Q13098 491 aa16.46■□□□□ 0.22
DHFR-201ENST00000439211 EFR3BQ9Y2G0 817 aa16.46■□□□□ 0.22
DHFR-201ENST00000439211 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.22
DHFR-201ENST00000439211 I3L4J1 428 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 FBP2O00757 339 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 EDF1O60869 148 aaKnown RBP16.45■□□□□ 0.22
DHFR-201ENST00000439211 TFPTP0C1Z6 253 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 PTGIRP43119 386 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 NADK2Q4G0N4 442 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 CGB2Q6NT52 195 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 GALNT4Q8N4A0 578 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
DHFR-201ENST00000439211 NCSTNQ92542 709 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 CCT7Q99832 543 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 TSSK1BQ9BXA7 367 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 GPR88Q9GZN0 384 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 EPB41L4BQ9H329 900 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 MRPL47Q9HD33 250 aaKnown RBP16.45■□□□□ 0.22
DHFR-201ENST00000439211 PRELID1Q9Y255 219 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 VARSP26640 1264 aaKnown RBP16.45■□□□□ 0.22
DHFR-201ENST00000439211 MTMR2Q13614 643 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 CCDC153Q494R4 210 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 SEZ6Q53EL9 994 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 OTOAQ7RTW8 1153 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 BBOF1Q8ND07 529 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 PLGRKTQ9HBL7 147 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
DHFR-201ENST00000439211 DTNAQ9Y4J8 743 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 FADS3Q9Y5Q0 445 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 KITP10721 976 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 GNA15P30679 374 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 POU5F1Q01860 360 aaKnown RBP16.45■□□□□ 0.22
DHFR-201ENST00000439211 STAT4Q14765 748 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 C14orf80Q86SX3 495 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 RHOT1Q8IXI2 618 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 SLC15A3Q8IY34 581 aa16.45■□□□□ 0.22
DHFR-201ENST00000439211 FAM71AQ8IYT1 594 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms