RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 C4orf33Q8N1A6 199 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 PPTC7Q8NI37 304 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 SPATA18Q8TC71 538 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 SMC6Q96SB8 1091 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 UBN1Q9NPG3 1134 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.71□□□□□ -0.38
HDAC8-214ENST00000439122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.71□□□□□ -0.38
HDAC8-214ENST00000439122 TSPAN16Q9UKR8 245 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 LOC102724159A0A0B4J2E5 919 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 E5RJQ4 531 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 APOC4-APOC2K7ER74 178 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 APOC2P02655 101 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GSTA1P08263 222 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 RBP3P10745 1247 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ADORA2AP29274 412 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 SSTR1P30872 391 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ADCYAP1R1P41586 468 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ZNF143P52747 638 aaPredicted RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 CDH6P55285 790 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 WDR4P57081 412 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 XRCC4Q13426 336 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ACAP1Q15027 740 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PWP2Q15269 919 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 OR6B2Q6IFH4 312 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 LINC01465Q8N7H1 131 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 C12orf29Q8N999 325 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 NAT8LQ8N9F0 302 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PEBP4Q96S96 227 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 RSAD1Q9HA92 442 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 TSPAN1O60635 241 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PIAS1O75925 651 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PDGFRAP16234 1089 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 TAC1P20366 129 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GPD1P21695 349 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 FOXN2P32314 431 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PHBP35232 272 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GJA5P36382 358 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 NRLP54845 237 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GPX6P59796 221 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 SNAPC2Q13487 334 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 KYAT1Q16773 422 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 C3orf62Q6ZUJ4 267 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 FAM47EQ6ZV65 393 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 RXFP2Q8WXD0 754 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PIWIL1Q96J94 861 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 CNPY3Q9BT09 278 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PITPNM3Q9BZ71 974 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 PSMC3IPQ9P2W1 217 aaPredicted RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 XPO7Q9UIA9 1087 aaKnown RBP12.7□□□□□ -0.38
HDAC8-214ENST00000439122 GINS2Q9Y248 185 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 ARL2BPQ9Y2Y0 163 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 C2CD2Q9Y426 696 aa12.7□□□□□ -0.38
HDAC8-214ENST00000439122 CLUHO75153 1309 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 TCRBV7S3A2A0A539 114 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 H3BRB1 525 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 UBOX5O94941 541 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 CYP3A5P20815 502 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 PCK1P35558 622 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 RGS7P49802 495 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
HDAC8-214ENST00000439122 INCA1Q0VD86 236 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 RAB6CQ53S08 254 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 MAMDC4Q6UXC1 1216 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 NPNTQ6UXI9 565 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 FAM183BPQ6ZVS7 135 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 ATP11CQ8NB49 1132 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 C16orf70Q9BSU1 422 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 RAB6CQ9H0N0 254 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 TUT1Q9H6E5 874 aaKnown RBP12.69□□□□□ -0.38
HDAC8-214ENST00000439122 SENP1Q9P0U3 644 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 SLC24A2Q9UI40 661 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
HDAC8-214ENST00000439122 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 C2CD4BA6NLJ0 364 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 HGSO14964 777 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PRPF4O43172 522 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 PRPSAP2O60256 369 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 TMEM63AO94886 807 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 ASMTLO95671 621 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 CA4P22748 312 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 RPA3P35244 121 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 CCNA1P78396 465 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 ATP11AP98196 1134 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC8-214ENST00000439122 MTFR1Q15390 333 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
HDAC8-214ENST00000439122 BBS9Q3SYG4 887 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms