RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 DDR2Q16832 855 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 TXNDC8Q6A555 127 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 Q6ZS52 159 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 CEP68Q76N32 757 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 CMTM8Q8IZV2 173 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 MAB21L3Q8N8X9 362 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 STKLD1Q8NE28 680 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 GLIS3Q8NEA6 775 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 CBWD1Q9BRT8 395 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 NAT10Q9H0A0 1025 aaKnown RBP9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 PDE11AQ9HCR9 933 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 DDX43Q9NXZ2 648 aaKnown RBP9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 DLL3Q9NYJ7 618 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 DACH1Q9UI36 760 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 CDV3Q9UKY7 258 aaKnown RBP9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 L1RE1Q9UN81 338 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 SNX9Q9Y5X1 595 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 CHD8Q9HCK8 2581 aa9.85□□□□□ -0.83
AC011228.1-201ENST00000439027 PRR5-ARHGAP8B1AHC4 643 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 SMAPO00193 183 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 F11P03951 625 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 TMEM191BP0C7N4 346 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CSH1P0DML2 217 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CSH2P0DML3 217 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 HMGA1P17096 107 aaKnown RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CYP2F1P24903 491 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 DDX6P26196 483 aaKnown RBP eCLIP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 WEE1P30291 646 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ARHGAP8P85298 464 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 SPEM2Q0P670 501 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 SRSF5Q13243 272 aaKnown RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 STIM1Q13586 685 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 LMBRD2Q68DH5 695 aaPredicted RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 LAIR1Q6GTX8 287 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 KLHL10Q6JEL2 608 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CC2D1AQ6P1N0 951 aaPredicted RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 MON1AQ86VX9 555 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 TMEM86AQ8N2M4 240 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 KIAA0895Q8NCT3 520 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 RNF214Q8ND24 703 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ACBD6Q9BR61 282 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 FGFBP2Q9BYJ0 223 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 EBF3Q9H4W6 596 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 TMEM206Q9H813 350 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CBX8Q9HC52 389 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 TRPC7Q9HCX4 862 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 PARD6AQ9NPB6 346 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 OLFML3Q9NRN5 406 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ZMYM5Q9UJ78 669 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 CCL26Q9Y258 94 aa9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 ZNF638Q14966 1978 aaKnown RBP9.84□□□□□ -0.83
AC011228.1-201ENST00000439027 PSMA7O14818 248 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 CAVIN2O95810 425 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 TNNC2P02585 160 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 RETP07949 1114 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 PCSK1P29120 753 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 ATXN1P54253 815 aaKnown RBP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 STX17P56962 302 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 AMPD2Q01433 879 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 GRSF1Q12849 480 aaKnown RBP eCLIP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 MYO1EQ12965 1108 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 RUNX3Q13761 415 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 WDR44Q5JSH3 913 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 INTS6LQ5JSJ4 861 aaKnown RBP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 TRIM68Q6AZZ1 485 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 STXBP4Q6ZWJ1 553 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 TMEM150AQ86TG1 271 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 LONP2Q86WA8 852 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 OSTM1Q86WC4 334 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 SPATA2LQ8IUW3 424 aaPredicted RBP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 ADGRF2Q8IZF7 708 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 GPD1LQ8N335 351 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 SYNPOQ8N3V7 929 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 GUF1Q8N442 669 aaKnown RBP9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 AOPEPQ8N6M6 819 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 NELFBQ8WX92 580 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 MTMR12Q9C0I1 747 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 TDP1Q9NUW8 608 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 C2orf42Q9NWW7 574 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 GTF3C4Q9UKN8 822 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 CTNND2Q9UQB3 1225 aa9.83□□□□□ -0.84
AC011228.1-201ENST00000439027 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 ZNF233A6NK53 670 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 BECN2A8MW95 431 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 K7ESF4 209 aa9.82□□□□□ -0.84
AC011228.1-201ENST00000439027 HCRTO43612 131 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms